ENSMUSG00000026238


Mus musculus

Features
Gene ID: ENSMUSG00000026238
  
Biological name :Ptma
  
Synonyms : P26350 / prothymosin alpha / Ptma
  
Possible biological names infered from orthology : P06454
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: C5
Gene start: 86526726
Gene end: 86530712
  
Corresponding Affymetrix probe sets: 10348078 (MoGene1.0st)   10417601 (MoGene1.0st)   10495873 (MoGene1.0st)   1423455_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000044188
Ensembl peptide - ENSMUSP00000140270
Ensembl peptide - ENSMUSP00000139849
Ensembl peptide - ENSMUSP00000139690
NCBI entrez gene - 19231     See in Manteia.
MGI - MGI:97803
RefSeq - NM_008972
RefSeq Peptide - NP_032998
swissprot - P26350
swissprot - A0A087WQN2
swissprot - Q0VGU2
swissprot - A0A087WPN6
swissprot - A0A087WP98
Ensembl - ENSMUSG00000026238
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ptmaaENSDARG00000021113Danio rerio
 PTMAENSGALG00000043329Gallus gallus
 PTMAENSG00000187514Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR004931  Prothymosin/parathymosin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0043486 histone exchange IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0033613 activating transcription factor binding IEA
 molecular_functionGO:0042393 histone binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001314 corneal opacity "complete or partial clouding of the cornea" [jte:Janan T. Eppig , Mouse Genome Informatics, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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