ENSMUSG00000027022


Mus musculus

Features
Gene ID: ENSMUSG00000027022
  
Biological name :Xirp2
  
Synonyms : Q4U4S6 / xin actin-binding repeat containing 2 / Xirp2
  
Possible biological names infered from orthology : A4UGR9
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: C1.3
Gene start: 67446002
Gene end: 67526614
  
Corresponding Affymetrix probe sets: 10472426 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000028410
Ensembl peptide - ENSMUSP00000107966
NCBI entrez gene - 241431     See in Manteia.
MGI - MGI:2685198
RefSeq - XM_011239520
RefSeq - NM_001024618
RefSeq - NM_001083919
RefSeq Peptide - NP_001077388
RefSeq Peptide - NP_001019789
swissprot - Q4U4S6
Ensembl - ENSMUSG00000027022
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 xirp2aENSDARG00000071113Danio rerio
 xirp2bENSDARG00000091090Danio rerio
 XIRP2ENSG00000163092Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Xirp1 / xin actin-binding repeat containing 1 / Q702N8*ENSMUSG000000792439


Protein motifs (from Interpro)
Interpro ID Name
 IPR001781  Zinc finger, LIM-type
 IPR012510  Actin-binding, Xin repeat
 IPR030072  Xin actin-binding repeat-containing protein 1/2
 IPR030107  Xin actin-binding repeat-containing protein 2


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003281 ventricular septum development IMP
 biological_processGO:0007507 heart development IEA
 biological_processGO:0030036 actin cytoskeleton organization IEA
 biological_processGO:0045216 cell-cell junction organization IMP
 biological_processGO:0055008 cardiac muscle tissue morphogenesis IMP
 cellular_componentGO:0001725 stress fiber IEA
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0030018 Z disc IDA
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0031941 filamentous actin IEA
 molecular_functionGO:0003779 actin binding ISO
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0051393 alpha-actinin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000277 abnormal heart shape "malformation of the form or the patterning of the heart" [J:18048]
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Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0000278 abnormal myocardial fiber morphology "malformed or poorly developed cardiac muscle fibers, the multinucleated muscle cells of the heart" [J:18048]
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Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0001262 decreased body weight "lower than normal average weight " [J:61295]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0001402 hypoactivity "reduced movement from one place to another" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, J:64289]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0001544 abnormal cardiovascular system physiology "anomalous function of the blood, blood vessels, and/or the heart" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0001625 cardiac hypertrophy "an increase in size of the cardiac tissue, not due to increased cell number " [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Csrp3tm1.1Rkn/Csrp3tm1.1Rkn
Genetic Background: either: (involves: Black Swiss) or (involves: C57BL/6N)

 MP:0001732 postnatal growth retardation "slow or limited development after birth " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Csrp3tm1.1Rkn/Csrp3tm1.1Rkn
Genetic Background: either: (involves: Black Swiss) or (involves: C57BL/6N)

 MP:0002190 disorganized myocardium "malformed or poorly developed cardiac muscle layers" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:67044]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0002833 increased heart weight "greater than average weight of the heart compared to the average for a particular strain" [RGD:Rat Genome Database submission]
Show

Allelic Composition: Csrp3tm1.1Rkn/Csrp3tm1.1Rkn
Genetic Background: either: (involves: Black Swiss) or (involves: C57BL/6N)

 MP:0002834 decreased heart weight "less than average weight of the heart compared to the average for a particular strain" [RGD:Rat Genome Database submission]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0003222 increased cardiomyocyte apoptosis "increase in the number of cardiac muscle cells undergoing programmed cell death" [RGD:Rat Genome Database submission]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0003402 decreased liver weight "reduced average weight of the bile-secreting exocrine gland" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0003638 abnormal response/metabolism to endogenous compounds "altered ability or inability to metabolize or respond to substances normally present in the body" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Csrp3tm1.1Rkn/Csrp3tm1.1Rkn
Genetic Background: either: (involves: Black Swiss) or (involves: C57BL/6N)

 MP:0003717 pallor "an unnatural paleness to the skin, generally attributable to anemia" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0003920 abnormal right ventricle morphology "structural anomaly of the right lower chamber of the heart " [smb:Susan M Bello, Mouse Genome Informatics Curator]
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Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0003921 abnormal left ventricle morphology "structural anomaly of the left lower chamber of the heart " [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0004011 decreased diastolic filling velocity "reduction in the rate of fluid inflow to the heart during diastole compared to controls; usually measured in the left ventricle; altered filling velocity often contributes to various cardiovascular disorders" [RGD:Rat Genome Database submission]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0004067 abnormal ventricular trabeculae morphology "aberrant structure of the supporting bundles of muscular fibers lining the walls of the ventricles of the heart" [monikat:Monika Tomczuk, Mouse Genome Informatics Curator]
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Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0004564 enlarged myocardial fiber "increased size of cardiac muscle fibers, the multinucleated muscle cells of the heart" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Csrp3tm1.1Rkn/Csrp3tm1.1Rkn
Genetic Background: either: (involves: Black Swiss) or (involves: C57BL/6N)

 MP:0004565 small myocardial fiber "decreased size of the cardiac muscle fibers, the multinucleated muscle cells of the heart" [MGI:monikat "Monika Tomczuk, Mouse Genome Informatics Curator"]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0006267 abnormal intercalated disc morphology "any structural abnormality in the electron dense junctional complex, at the end to end contacts of cardiac muscle cells, that contains two types of membrane junctions i.e. gap junctions and desmosomes" [anna:Anna Anagnostopoulos, Mouse Genome Informatics Curator, J:64280]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0008489 postnatal slow weight gain "the weight gain over a span of postnatal developmental time is slower than controls, with or without ever attaining a similar weight to controls as adults" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0009674 decreased birth weight "reduction in average weight at birth compared to controls" [RGD:cur "Rat Genome Database submission"]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0010420 muscular ventricular septal defect "abnormal communications between the two lower chambers of the heart, involving the muscular septum and often occurring as multiple communications, and includes central muscular or midmuscular, apical, or marginal communications when the defect is along the RV-septal junction; any single defect observed from the LV aspect may have several openings on the RV aspect" [http://emedicine.medscape.com]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0010640 ventricular myocardium compact layer hypoplasia "underdevelopment or reduced size, usually due to a reduced number of cells, of the ventricular portion of the outer, dense layer of the myocardium" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

 MP:0011085 complete postnatal lethality "premature death anytime between the neonatal period and weaning age of all organisms of a given genotype in a population (Mus: P1 to approximately 3 weeks of age)" [MGI:csmith]
Show

Allelic Composition: A/?,Lystbg/Lystbg,Tyrp1+/?
Genetic Background: Not Specified

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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