ENSMUSG00000027300


Mus musculus

Features
Gene ID: ENSMUSG00000027300
  
Biological name :Ubox5
  
Synonyms : Q925F4 / Ubox5 / U box domain containing 5
  
Possible biological names infered from orthology : O94941
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: F1
Gene start: 130590002
Gene end: 130630038
  
Corresponding Affymetrix probe sets: 10487690 (MoGene1.0st)   1418598_at (Mouse Genome 430 2.0 Array)   1432064_at (Mouse Genome 430 2.0 Array)   1439867_at (Mouse Genome 430 2.0 Array)   1457242_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000028761
Ensembl peptide - ENSMUSP00000114878
NCBI entrez gene - 140629     See in Manteia.
MGI - MGI:2154658
RefSeq - NM_001255994
RefSeq - NM_001255993
RefSeq - NM_080562
RefSeq Peptide - NP_001242922
RefSeq Peptide - NP_001242923
RefSeq Peptide - NP_542129
swissprot - Q925F4
swissprot - Q543N0
swissprot - F2Z402
Ensembl - ENSMUSG00000027300
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ubox5ENSDARG00000058563Danio rerio
 UBOX5ENSGALG00000035134Gallus gallus
 UBOX5ENSG00000185019Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR003613  U box domain
 IPR008979  Galactose-binding-like domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR017907  Zinc finger, RING-type, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000209 protein polyubiquitination IDA
 biological_processGO:0006468 protein phosphorylation IEA
 biological_processGO:0016567 protein ubiquitination IEA
 cellular_componentGO:0005634 nucleus IDA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005925 focal adhesion IEA
 cellular_componentGO:0016604 nuclear body IEA
 molecular_functionGO:0004672 protein kinase activity IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IEA
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0031625 ubiquitin protein ligase binding IEA
 molecular_functionGO:0034450 ubiquitin-ubiquitin ligase activity IDA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity IDA


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002092 abnormal eye morphology "abnormal development of the eye tissues resulting in morphological abnormality or abnormal structure of the visual system" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Txniptm1b(EUCOMM)Hmgu/Txniptm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Txniptm1b(EUCOMM)Hmgu/H

 MP:0005012 decreased eosinophil count "fewer than normal eosinophil numbers " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Txniptm1b(EUCOMM)Hmgu/Txniptm1b(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Txniptm1b(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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