ENSMUSG00000027309


Mus musculus

Features
Gene ID: ENSMUSG00000027309
  
Biological name :4930402H24Rik
  
Synonyms : 4930402H24Rik / Q7TT23
  
Possible biological names infered from orthology : C20orf194 / chromosome 20 open reading frame 194 / Q5TEA3
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: F1
Gene start: 130706200
Gene end: 130906406
  
Corresponding Affymetrix probe sets: 10487748 (MoGene1.0st)   1429694_at (Mouse Genome 430 2.0 Array)   1430285_at (Mouse Genome 430 2.0 Array)   1430286_s_at (Mouse Genome 430 2.0 Array)   1433409_at (Mouse Genome 430 2.0 Array)   1434126_at (Mouse Genome 430 2.0 Array)   1438038_at (Mouse Genome 430 2.0 Array)   1439812_at (Mouse Genome 430 2.0 Array)   1453465_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117915
Ensembl peptide - ENSMUSP00000120811
Ensembl peptide - ENSMUSP00000120742
Ensembl peptide - ENSMUSP00000119346
Ensembl peptide - ENSMUSP00000118946
Ensembl peptide - ENSMUSP00000046992
Ensembl peptide - ENSMUSP00000105872
Ensembl peptide - ENSMUSP00000112540
Ensembl peptide - ENSMUSP00000113481
NCBI entrez gene - 228602     See in Manteia.
MGI - MGI:1923029
RefSeq - XM_017317759
RefSeq - NM_001311147
RefSeq - NM_029432
RefSeq - XM_011239473
RefSeq - XM_011239474
RefSeq Peptide - NP_083708
RefSeq Peptide - NP_001298076
swissprot - Q7TT23
swissprot - B0R039
swissprot - Q3V0A7
swissprot - B0R037
swissprot - A2AKU3
swissprot - F6VYF3
swissprot - F7ATN7
swissprot - F6W2S3
swissprot - B0R038
Ensembl - ENSMUSG00000027309
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-194c3.5ENSDARG00000079056Danio rerio
 ENSGALG00000016026Gallus gallus
 ENSGALG00000031683Gallus gallus
 Q5TEA3ENSG00000088854Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
No match


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0005179 decreased total circulating cholesterol level "less than the normal concentration in the blood of these most abundant steroids in animal tissues, and precursors to steroid hormones and bile salts; also components of plasma membranes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: C1ql3tm1.2Sud/C1ql3+
Genetic Background: involves: 129S6/SvEvTac * BALB/cJ * C57BL/6 * SJL

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr