ENSMUSG00000027329


Mus musculus

Features
Gene ID: ENSMUSG00000027329
  
Biological name :Spef1
  
Synonyms : Q99JL1 / Spef1 / Sperm flagellar protein 1
  
Possible biological names infered from orthology : Q9Y4P9 / sperm flagellar 1
  
Species: Mus musculus
  
Chr. number: 2
Strand: -1
Band: F1
Gene start: 131170261
Gene end: 131187282
  
Corresponding Affymetrix probe sets: 10487858 (MoGene1.0st)   1424817_at (Mouse Genome 430 2.0 Array)   1444397_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000114178
Ensembl peptide - ENSMUSP00000105847
Ensembl peptide - ENSMUSP00000028801
NCBI entrez gene - 70997     See in Manteia.
MGI - MGI:3513546
RefSeq - NM_027641
RefSeq Peptide - NP_081917
swissprot - Q99JL1
swissprot - F6ZW13
Ensembl - ENSMUSG00000027329
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPEF1ENSG00000101222Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
6430531B16Rik / RIKEN cDNA 6430531B16 geneENSMUSG0000007379537
Q8K3V1 / Spata4 / Spermatosis-associated protein 4 / Q8NEY3* / spermatogenesis associated 4*ENSMUSG0000003151818


Protein motifs (from Interpro)
Interpro ID Name
 IPR010441  CH-like domain in sperm protein
 IPR036872  CH domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007026 negative regulation of microtubule depolymerization IDA
 biological_processGO:0016477 cell migration ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0005930 axoneme ISS
 cellular_componentGO:0031514 motile cilium IEA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0008017 microtubule binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Rpgrip1ltm1a(EUCOMM)Wtsi/Rpgrip1l+
Genetic Background: C57BL/6N-Rpgrip1ltm1a(EUCOMM)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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