ENSMUSG00000027642


Mus musculus

Features
Gene ID: ENSMUSG00000027642
  
Biological name :Rpn2
  
Synonyms : Mus musculus ribophorin II (Rpn2), transcript variant 4, mRNA. / Q9DBG6 / Rpn2
  
Possible biological names infered from orthology : P04844 / ribophorin II
  
Species: Mus musculus
  
Chr. number: 2
Strand: 1
Band: H1
Gene start: 157279017
Gene end: 157326319
  
Corresponding Affymetrix probe sets: 10477946 (MoGene1.0st)   1418896_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029171
Ensembl peptide - ENSMUSP00000112081
NCBI entrez gene - 20014     See in Manteia.
MGI - MGI:98085
RefSeq - XM_011239388
RefSeq - NM_001355165
RefSeq - NM_019642
RefSeq - XM_006499021
RefSeq - XM_006499022
RefSeq - XM_006499023
RefSeq - XM_006499024
RefSeq Peptide - NP_001342094
RefSeq Peptide - NP_062616
swissprot - Q9DBG6
swissprot - A2ACG7
Ensembl - ENSMUSG00000027642
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rpn2ENSDARG00000009724Danio rerio
 RPN2ENSGALG00000003815Gallus gallus
 RPN2ENSG00000118705Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008814  Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit Swp1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006486 protein glycosylation IEA
 biological_processGO:0006487 protein N-linked glycosylation IEA
 biological_processGO:0007568 aging IEA
 biological_processGO:0042493 response to drug IEA
 cellular_componentGO:0000421 autophagosome membrane IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0005791 rough endoplasmic reticulum IEA
 cellular_componentGO:0008250 oligosaccharyltransferase complex IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0004579 dolichyl-diphosphooligosaccharide-protein glycotransferase activity IBA
 molecular_functionGO:0043022 ribosome binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001554 increased circulating free fatty acid level "higher than normal levels of unesterified fatty acids in the blood" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:65146]
Show

Allelic Composition: Rnf10tm1a(KOMP)Wtsi/Rnf10tm1a(KOMP)Wtsi
Genetic Background: C57BL/6N-Rnf10tm1a(KOMP)Wtsi/Wtsi

 MP:0003442 decreased circulating glycerol level "lower than normal concentration of glycerol in the blood" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Rnf10tm1a(KOMP)Wtsi/Rnf10tm1a(KOMP)Wtsi
Genetic Background: C57BL/6N-Rnf10tm1a(KOMP)Wtsi/Wtsi

 MP:0003443 increased circulating glycerol level "higher than normal concentration of glycerol in the blood" [smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Rnf10tm1a(KOMP)Wtsi/Rnf10tm1a(KOMP)Wtsi
Genetic Background: C57BL/6N-Rnf10tm1a(KOMP)Wtsi/Wtsi

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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