ENSMUSG00000027722


Mus musculus

Features
Gene ID: ENSMUSG00000027722
  
Biological name :Spata5
  
Synonyms : Q3UMC0 / Spata5 / Spermatosis-associated protein 5
  
Possible biological names infered from orthology : Q8NB90 / spermatogenesis associated 5
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: B
Gene start: 37419896
Gene end: 37579096
  
Corresponding Affymetrix probe sets: 10491704 (MoGene1.0st)   1417254_at (Mouse Genome 430 2.0 Array)   1438844_x_at (Mouse Genome 430 2.0 Array)   1442456_at (Mouse Genome 430 2.0 Array)   1448639_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000143349
Ensembl peptide - ENSMUSP00000029277
Ensembl peptide - ENSMUSP00000103747
NCBI entrez gene - 57815     See in Manteia.
MGI - MGI:1927170
RefSeq - XM_017319673
RefSeq - NM_001163511
RefSeq - NM_001310473
RefSeq - NM_021343
RefSeq - XM_017319672
RefSeq Peptide - NP_001156983
RefSeq Peptide - NP_001297402
RefSeq Peptide - NP_067318
swissprot - A0A0G2JFY0
swissprot - Q3UMC0
swissprot - A0A0A0MQ80
Ensembl - ENSMUSG00000027722
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SPATA5ENSDARG00000104869Danio rerio
 ENSGALG00000011833Gallus gallus
 Q8NB90ENSG00000145375Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003338  CDC48, N-terminal subdomain
 IPR003593  AAA+ ATPase domain
 IPR003959  ATPase, AAA-type, core
 IPR003960  ATPase, AAA-type, conserved site
 IPR009010  Aspartate decarboxylase-like domain superfamily
 IPR027417  P-loop containing nucleoside triphosphate hydrolase
 IPR029067  CDC48 domain 2-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007420 brain development IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0005524 ATP binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Smurf2tm1b(EUCOMM)Wtsi/Smurf2tm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Smurf2tm1b(EUCOMM)Wtsi/H

 MP:0013292 embryonic lethality prior to organogenesis "death prior to the completion of embryo turning (Mus: E9-9.5)" [MGI:smb]
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Allelic Composition: Smurf2tm1b(EUCOMM)Wtsi/Smurf2tm1b(EUCOMM)Wtsi
Genetic Background: C57BL/6N-Smurf2tm1b(EUCOMM)Wtsi/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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