ENSMUSG00000027912


Mus musculus

Features
Gene ID: ENSMUSG00000027912
  
Biological name :Lce1m
  
Synonyms : Lce1m / Mus musculus late cornified envelope 1M (Lce1m), transcript variant 1, mRNA.
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 3
Strand: -1
Band: F1
Gene start: 93017810
Gene end: 93019060
  
Corresponding Affymetrix probe sets: 10499954 (MoGene1.0st)   1429565_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029520
Ensembl peptide - ENSMUSP00000141488
NCBI entrez gene - 66203     See in Manteia.
MGI - MGI:1913453
RefSeq - XM_006501877
RefSeq - NM_001355725
RefSeq - NM_025420
RefSeq Peptide - NP_001342654
RefSeq Peptide - NP_079696
swissprot - Q9CR91
swissprot - A0A0A6YWC3
Ensembl - ENSMUSG00000027912
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026075  Small proline-rich protein/late cornified envelope protein
 IPR028205  Late cornified envelope protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008544 epidermis development IEA
 biological_processGO:0018149 peptide cross-linking IBA
 biological_processGO:0030216 keratinocyte differentiation IBA
 cellular_componentGO:0001533 cornified envelope IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0005198 structural molecule activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0008045 decreased NK cell number "reduction in the number of non-T, non-B lymphocytes, having a granular morphology and which are important in innate immunity to viruses and other intracellular pathogens; in addition, these cells can kill certain tumor cells" [ISBN:0-8153-1691-7 "Immunobiology, The Immune System in Health and Disease"]
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Allelic Composition: Xbp1tm1a(EUCOMM)Wtsi/Xbp1+
Genetic Background: C57BL/6N-Xbp1tm1a(EUCOMM)Wtsi/Ics

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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