ENSMUSG00000028085


Mus musculus

Features
Gene ID: ENSMUSG00000028085
  
Biological name :Gatb
  
Synonyms : Gatb / Glutamyl-tRNA(Gln) amidotransferase subunit B, mitochondrial / Q99JT1
  
Possible biological names infered from orthology : glutamyl-tRNA amidotransferase subunit B / O75879
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: F1
Gene start: 85574119
Gene end: 85655622
  
Corresponding Affymetrix probe sets: 10492846 (MoGene1.0st)   1424282_at (Mouse Genome 430 2.0 Array)   1444502_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000103299
Ensembl peptide - ENSMUSP00000103301
Ensembl peptide - ENSMUSP00000119949
NCBI entrez gene - 229487     See in Manteia.
MGI - MGI:2442496
RefSeq - XM_011240080
RefSeq - NM_144896
RefSeq - XM_006501329
RefSeq - XM_006501330
RefSeq - XM_006501331
RefSeq Peptide - NP_659145
swissprot - Q3TLZ6
swissprot - Q8BW84
swissprot - Q99JT1
Ensembl - ENSMUSG00000028085
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 gatbENSDARG00000037309Danio rerio
 GATBENSGALG00000010097Gallus gallus
 GATBENSG00000059691Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003789  Aspartyl/glutamyl-tRNA amidotransferase subunit B-like
 IPR004413  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit
 IPR006075  Aspartyl/Glutamyl-tRNA(Gln) amidotransferase, subunit B/E, catalytic
 IPR014746  Glutamine synthetase/guanido kinase, catalytic domain
 IPR017958  Glutamyl-tRNA(Gln) amidotransferase, subunit B, conserved site
 IPR017959  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, subunit B /E
 IPR018027  Asn/Gln amidotransferase
 IPR023168  Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006412 translation IEA
 biological_processGO:0032543 mitochondrial translation IEA
 biological_processGO:0070681 glutaminyl-tRNAGln biosynthesis via transamidation IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0030956 glutamyl-tRNA(Gln) amidotransferase complex IEA
 molecular_functionGO:0000166 nucleotide binding IEA
 molecular_functionGO:0003824 catalytic activity IEA
 molecular_functionGO:0005524 ATP binding IEA
 molecular_functionGO:0016874 ligase activity IEA
 molecular_functionGO:0016884 carbon-nitrogen ligase activity, with glutamine as amido-N-donor IEA
 molecular_functionGO:0050567 glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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