ENSMUSG00000028189


Mus musculus

Features
Gene ID: ENSMUSG00000028189
  
Biological name :Ctbs
  
Synonyms : Ctbs / Di-N-acetylchitobiase / Q8R242
  
Possible biological names infered from orthology : chitobiase / Q01459
  
Species: Mus musculus
  
Chr. number: 3
Strand: 1
Band: H2
Gene start: 146449795
Gene end: 146465849
  
Corresponding Affymetrix probe sets: 10496813 (MoGene1.0st)   1427658_at (Mouse Genome 430 2.0 Array)   1429943_at (Mouse Genome 430 2.0 Array)   1452504_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029840
Ensembl peptide - ENSMUSP00000059167
Ensembl peptide - ENSMUSP00000142380
NCBI entrez gene - 74245     See in Manteia.
MGI - MGI:1921495
RefSeq - NM_001293672
RefSeq - NM_028836
RefSeq Peptide - NP_001280601
RefSeq Peptide - NP_083112
swissprot - Q8R242
swissprot - Q102J0
swissprot - A0A0G2JDI3
Ensembl - ENSMUSG00000028189
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ctbsENSDARG00000100002Danio rerio
 CTBSENSGALG00000008780Gallus gallus
 CTBSENSG00000117151Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001223  Glycoside hydrolase family 18, catalytic domain
 IPR001579  Glycoside hydrolase, chitinase active site
 IPR011583  Chitinase II
 IPR017853  Glycoside hydrolase superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0005975 carbohydrate metabolic process IEA
 biological_processGO:0006032 chitin catabolic process IBA
 biological_processGO:0008152 metabolic process IEA
 biological_processGO:0009313 oligosaccharide catabolic process IEA
 cellular_componentGO:0005576 extracellular region IBA
 cellular_componentGO:0005764 lysosome IEA
 molecular_functionGO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA
 molecular_functionGO:0004568 chitinase activity IBA
 molecular_functionGO:0008061 chitin binding IBA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016798 hydrolase activity, acting on glycosyl bonds IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004756 abnormal proximal convoluted tubule morphology "any structural anomaly of the convoluted portion of the duct system of the nephron that extends from the renal glomeurlar capsule in the kidney cortex into the kidney medulla where it joins the loop of Henle; fluid entering the proximal convoluted tubule is reabsorbed into the peritubular capillaries, including approximately two-thirds of the filtered salt and water and all filtered organic solutes" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Arl6ip5tm1.2Jwzh/Arl6ip5tm1.2Jwzh
Genetic Background: B6.129X1-Arl6ip5tm1.2Jwzh

 MP:0005621 abnormal cell physiology "aberration in the vital processes of the cell " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, hdene:Howard Dene , Mouse Genome Informatics Curator]
Show

Allelic Composition: Arl6ip5tm1.2Jwzh/Arl6ip5tm1.2Jwzh
Genetic Background: B6.129X1-Arl6ip5tm1.2Jwzh

 MP:0008114 abnormal Kupffer cell morphology "any structural anomaly of the phagocytic macrophages residing on the luminal surface of the hepatic sinusoids" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Arl6ip5tm1.2Jwzh/Arl6ip5tm1.2Jwzh
Genetic Background: B6.129X1-Arl6ip5tm1.2Jwzh

 MP:0009643 abnormal urine homeostasis "anomaly in the processes involved in the maintenance of an internal equilibrium of various functions and chemical or protein composition of the urine" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Arl6ip5tm1.2Jwzh/Arl6ip5tm1.2Jwzh
Genetic Background: B6.129X1-Arl6ip5tm1.2Jwzh

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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