ENSMUSG00000028293


Mus musculus

Features
Gene ID: ENSMUSG00000028293
  
Biological name :Slc35a1
  
Synonyms : CMP-sialic acid transporter / Q61420 / Slc35a1
  
Possible biological names infered from orthology : P78382 / solute carrier family 35 member A1
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: A5
Gene start: 34663257
Gene end: 34687438
  
Corresponding Affymetrix probe sets: 10511975 (MoGene1.0st)   1417538_at (Mouse Genome 430 2.0 Array)   1417539_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000029970
Ensembl peptide - ENSMUSP00000119125
NCBI entrez gene - 24060     See in Manteia.
MGI - MGI:1345622
RefSeq - XM_006537892
RefSeq - NM_011895
RefSeq - XM_006537891
RefSeq Peptide - NP_036025
swissprot - Q61420
swissprot - F6R7Y0
Ensembl - ENSMUSG00000028293
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 slc35a1ENSDARG00000040180Danio rerio
 SLC35A1ENSGALG00000015808Gallus gallus
 P78382ENSG00000164414Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q9R0M8 / Slc35a2 / solute carrier family 35 (UDP-galactose transporter), member A2 / P78381* / solute carrier family 35 member A2*ENSMUSG0000003115644
Q8R1T4 / Slc35a3 / UDP-N-acetylglucosamine transporter / Q9Y2D2* / solute carrier family 35 member A3*ENSMUSG0000002795737
Q921R7 / Slc35a5 / Mus musculus solute carrier family 35, member A5 (Slc35a5), transcript variant 2, mRNA. / Q9BS91* / solute carrier family 35 member A5*ENSMUSG0000002266424
Q9D321 / Slc35a4 / Probable UDP-sugar transporter protein SLC35A4 / Q96G79* / L0R6Q1* / solute carrier family 35 member A4*ENSMUSG0000003327222


Protein motifs (from Interpro)
Interpro ID Name
 IPR007271  Nucleotide-sugar transporter


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008643 carbohydrate transport IEA
 biological_processGO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEA
 cellular_componentGO:0000139 Golgi membrane IEA
 cellular_componentGO:0005794 Golgi apparatus IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005351 carbohydrate:proton symporter activity IEA
 molecular_functionGO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEA


Pathways (from Reactome)
Pathway description
Sialic acid metabolism
Transport of nucleotide sugars


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011100 complete preweaning lethality "death of all organisms of a given genotype in a population between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Casp9tm1Flv/Casp9tm1Flv
Genetic Background: B6.129S1-Casp9tm1Flv

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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