ENSMUSG00000028345


Mus musculus

Features
Gene ID: ENSMUSG00000028345
  
Biological name :Tex10
  
Synonyms : Mus musculus testis expressed 10 (Tex10), transcript variant 2, mRNA. / Q3URQ0 / Tex10
  
Possible biological names infered from orthology : Q9NXF1 / testis expressed 10
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: B1
Gene start: 48430858
Gene end: 48473459
  
Corresponding Affymetrix probe sets: 10512867 (MoGene1.0st)   1434317_s_at (Mouse Genome 430 2.0 Array)   1439464_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030030
Ensembl peptide - ENSMUSP00000114669
Ensembl peptide - ENSMUSP00000132498
NCBI entrez gene - 269536     See in Manteia.
MGI - MGI:1344413
RefSeq - XM_006537957
RefSeq - NM_001355740
RefSeq - NM_172304
RefSeq - XM_006537955
RefSeq - XM_006537956
RefSeq Peptide - NP_001342669
RefSeq Peptide - NP_758508
swissprot - Q3URQ0
swissprot - F6ZZ61
Ensembl - ENSMUSG00000028345
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tex10ENSDARG00000055885Danio rerio
 TEX10ENSGALG00000013438Gallus gallus
 TEX10ENSG00000136891Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR011989  Armadillo-like helical
 IPR016024  Armadillo-type fold
 IPR021133  HEAT, type 2
 IPR024679  Pre-rRNA-processing protein Ipi1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0071339 MLL1 complex IEA
 cellular_componentGO:0097344 Rix1 complex IBA
 molecular_functionGO:0005488 binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011092 complete embryonic lethality "death of all organisms of a given genotype in a population within the embryonic period prior to organogenesis (Mus: prior to E14)" [MGI:csmith]
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Allelic Composition: Rbm5sda/Rbm5sda
Genetic Background: involves: C57BL/6J * CBA

 MP:0012113 decreased inner cell mass proliferation 
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Allelic Composition: Rbm5sda/Rbm5sda
Genetic Background: involves: C57BL/6J * CBA

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000018921 Pelp1 / Q9DBD5 / Proline-, glutamic acid- and leucine-rich protein 1 / Q8IZL8* / proline, glutamate and leucine rich protein 1*  / complex
 ENSMUSG00000035754 Wdr18 / Q4VBE8 / WD repeat domain 18 / Q9BV38*  / complex






 

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