ENSMUSG00000028385


Mus musculus

Features
Gene ID: ENSMUSG00000028385
  
Biological name :Snx30
  
Synonyms : Q8CE50 / Snx30 / Sorting nexin-30
  
Possible biological names infered from orthology : Q5VWJ9 / sorting nexin family member 30
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: B3
Gene start: 59805840
Gene end: 59904737
  
Corresponding Affymetrix probe sets: 10505224 (MoGene1.0st)   1437120_at (Mouse Genome 430 2.0 Array)   1456479_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030080
NCBI entrez gene - 209131     See in Manteia.
MGI - MGI:2443882
RefSeq - XM_006537725
RefSeq - NM_172468
RefSeq - XM_006537724
RefSeq Peptide - NP_766056
swissprot - Q8CE50
Ensembl - ENSMUSG00000028385
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 snx30ENSDARG00000069601Danio rerio
 SNX30ENSGALG00000015660Gallus gallus
 SNX30ENSG00000148158Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Snx7 / Q9CY18 / sorting nexin 7 / Q9UNH6*ENSMUSG0000002800743
Snx4 / Q91YJ2 / Sorting nexin-4 / O95219*ENSMUSG0000002280821


Protein motifs (from Interpro)
Interpro ID Name
 IPR001683  Phox homologous domain
 IPR004148  BAR domain
 IPR027267  AH/BAR domain superfamily
 IPR028649  Sorting nexin-30
 IPR036871  PX domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006897 endocytosis IBA
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0016050 vesicle organization IBA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005768 endosome IBA
 cellular_componentGO:0019898 extrinsic component of membrane IBA
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0035091 phosphatidylinositol binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr