ENSMUSG00000028430


Mus musculus

Features
Gene ID: ENSMUSG00000028430
  
Biological name :Nol6
  
Synonyms : Nol6 / Nucleolar protein 6 / Q8R5K4
  
Possible biological names infered from orthology : Q9H6R4
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: A5
Gene start: 41114427
Gene end: 41124455
  
Corresponding Affymetrix probe sets: 10512165 (MoGene1.0st)   1424472_at (Mouse Genome 430 2.0 Array)   1425629_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000030138
NCBI entrez gene - 230082     See in Manteia.
MGI - MGI:2140151
RefSeq - NM_139236
RefSeq Peptide - NP_631982
swissprot - Q8R5K4
Ensembl - ENSMUSG00000028430
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nol6ENSDARG00000059711Danio rerio
 ENSGALG00000030730Gallus gallus
 ENSGALG00000014168Gallus gallus
 NOL6ENSG00000165271Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR005554  Nrap protein
 IPR035082  Nrap protein domain 1
 IPR035367  Nrap protein, domain 2
 IPR035368  Nrap protein, domain 3
 IPR035369  Nrap protein, domain 4
 IPR035370  Nrap protein, domain 5
 IPR035371  Nrap protein, domain 6


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006364 rRNA processing IBA
 biological_processGO:0006409 tRNA export from nucleus IBA
 cellular_componentGO:0000794 condensed nuclear chromosome IDA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005694 chromosome IEA
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005739 mitochondrion IEA
 cellular_componentGO:0032040 small-subunit processome IBA
 cellular_componentGO:0032545 CURI complex IBA
 cellular_componentGO:0034456 UTP-C complex IBA
 molecular_functionGO:0003723 RNA binding IEA


Pathways (from Reactome)
Pathway description
Major pathway of rRNA processing in the nucleolus and cytosol


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000023971 Rrp36 / ribosomal RNA processing 36 / Q96EU6*  / complex
 ENSMUSG00000018040 Rrp7a / Q9D1C9 / Ribosomal RNA-processing A / Q9Y3A4* / ribosomal RNA processing 7 homolog A*  / complex






 

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