ENSMUSG00000028849


Mus musculus

Features
Gene ID: ENSMUSG00000028849
  
Biological name :Map7d1
  
Synonyms : A2AJI0 / Map7d1 / Mus musculus MAP7 domain containing 1 (Map7d1), transcript variant 3, mRNA.
  
Possible biological names infered from orthology : MAP7 domain containing 1 / Q3KQU3
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D2.2
Gene start: 126232167
Gene end: 126256343
  
Corresponding Affymetrix probe sets: 10516305 (MoGene1.0st)   1424040_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113250
Ensembl peptide - ENSMUSP00000120292
Ensembl peptide - ENSMUSP00000054338
Ensembl peptide - ENSMUSP00000101738
NCBI entrez gene - 245877     See in Manteia.
MGI - MGI:2384297
RefSeq - XM_006503113
RefSeq - NM_001145970
RefSeq - NM_001347198
RefSeq - NM_144941
RefSeq - XM_006503109
RefSeq - XM_006503110
RefSeq - XM_006503111
RefSeq - XM_006503112
RefSeq Peptide - NP_001334127
RefSeq Peptide - NP_659190
RefSeq Peptide - NP_001139442
swissprot - A8Y5P4
swissprot - A2AJI0
swissprot - F6WF36
swissprot - A2AJI1
Ensembl - ENSMUSG00000028849
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 map7d1aENSDARG00000098802Danio rerio
 map7d1bENSDARG00000104701Danio rerio
 si:ch73-281i18.3ENSDARG00000089402Danio rerio
 si:ch73-281i18.4ENSDARG00000102533Danio rerio
 si:ch73-281i18.6ENSDARG00000101490Danio rerio
 si:ch73-281i18.7ENSDARG00000103395Danio rerio
 MAP7D1ENSGALG00000021634Gallus gallus
 MAP7D1ENSG00000116871Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Map7 / microtubule associated protein 7 / Q14244*ENSMUSG0000001999632
A2AG50 / Map7d2 / MAP7 domain-containing protein 2 / Q96T17* / MAP7 domain containing 2*ENSMUSG0000004102023
A2AEY4 / Map7d3 / MAP7 domain-containing protein 3 / Q8IWC1* / MAP7 domain containing 3*ENSMUSG0000006787815


Protein motifs (from Interpro)
Interpro ID Name
 IPR008604  Microtubule-associated protein 7 family


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000226 microtubule cytoskeleton organization IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005819 spindle IEA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0015630 microtubule cytoskeleton IEA
 molecular_functionGO:0005198 structural molecule activity IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr