ENSMUSG00000029392


Mus musculus

Features
Gene ID: ENSMUSG00000029392
  
Biological name :Rilpl1
  
Synonyms : Q9JJC6 / Rilpl1 / RILP-like protein 1
  
Possible biological names infered from orthology : Q5EBL4 / Rab interacting lysosomal protein like 1
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: F
Gene start: 124493080
Gene end: 124531391
  
Corresponding Affymetrix probe sets: 10533849 (MoGene1.0st)   1438438_at (Mouse Genome 430 2.0 Array)   1447852_x_at (Mouse Genome 430 2.0 Array)   1450449_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000142757
Ensembl peptide - ENSMUSP00000143250
Ensembl peptide - ENSMUSP00000142887
Ensembl peptide - ENSMUSP00000050014
NCBI entrez gene - 75695     See in Manteia.
MGI - MGI:1922945
RefSeq - XM_006530491
RefSeq - XM_006530492
RefSeq - XM_011248245
RefSeq - XM_011248246
RefSeq - NM_021430
RefSeq Peptide - NP_067405
swissprot - Q9JJC6
swissprot - A0A0G2JES6
swissprot - A0A0G2JEF9
swissprot - A0A0G2JFP1
Ensembl - ENSMUSG00000029392
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 RILPL1ENSGALG00000003314Gallus gallus
 Q5EBL4ENSG00000188026Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rilp / Q5ND29 / Rab interacting lysosomal protein / Q96NA2*ENSMUSG0000003819520
Q99LE1 / Rilpl2 / RILP-like protein 2 / Q969X0* / Rab interacting lysosomal protein like 2*ENSMUSG0000002940114


Protein motifs (from Interpro)
Interpro ID Name
 IPR019143  JNK/Rab-associated protein-1, N-terminal
 IPR021563  Rab interacting lysosomal protein, dimerization domain
 IPR034743  RH1 domain
 IPR034744  RH2 domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0003382 epithelial cell morphogenesis IMP
 biological_processGO:0015031 protein transport IEA
 biological_processGO:0060271 cilium assembly IBA
 biological_processGO:1901214 regulation of neuron death IEA
 biological_processGO:1903445 protein transport from ciliary membrane to plasma membrane IMP
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005829 cytosol ISS
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005929 cilium IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0036064 ciliary basal body IBA
 cellular_componentGO:0042995 cell projection IEA
 molecular_functionGO:0031267 small GTPase binding IBA
 molecular_functionGO:0046983 protein dimerization activity IEA
 molecular_functionGO:0051959 dynein light intermediate chain binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001488 increased startle reflex "reduced threshold or more severe reflex response to variable stimuli, often auditory; usually measured by amplitude of whole body flinch" [What s Wrong With My Mouse?:ISBN 0-471-31639-3, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

 MP:0003382 straub tail "condition in which an animal carries its tail in an erect (vertical or nearly vertical) position; often seen upon opioid and other drug treatment" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

 MP:0013279 increased fasted circulating glucose level "increase in the amount of glucose in the blood at some defined time point after eating compared to controls" [MGI:Armida_Di_Fenza]
Show

Allelic Composition: Psphtm1.1(KOMP)Vlcg/Psphtm1.1(KOMP)Vlcg
Genetic Background: C57BL/6N-Psphtm1.1(KOMP)Vlcg/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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