ENSMUSG00000029787


Mus musculus

Features
Gene ID: ENSMUSG00000029787
  
Biological name :Avl9
  
Synonyms : Avl9 / Late secretory pathway / Q80U56
  
Possible biological names infered from orthology : AVL9 cell migration associated / Q8NBF6
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: B3
Gene start: 56714899
Gene end: 56761912
  
Corresponding Affymetrix probe sets: 10538526 (MoGene1.0st)   1430144_at (Mouse Genome 430 2.0 Array)   1433177_at (Mouse Genome 430 2.0 Array)   1434659_at (Mouse Genome 430 2.0 Array)   1457023_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000031805
Ensembl peptide - ENSMUSP00000145053
Ensembl peptide - ENSMUSP00000144696
NCBI entrez gene - 78937     See in Manteia.
MGI - MGI:1926187
RefSeq - NM_030235
RefSeq Peptide - NP_084511
swissprot - A0A0N4SVD3
swissprot - A0A0N4SUI4
swissprot - Q80U56
Ensembl - ENSMUSG00000029787
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 avl9ENSDARG00000055538Danio rerio
 AVL9ENSGALG00000041568Gallus gallus
 AVL9ENSG00000105778Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR018307  AVL9/DENND6 domain
 IPR037516  Tripartite DENN domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0016477 cell migration IEA
 biological_processGO:0051179 localization IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0055037 recycling endosome ISS
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr