ENSMUSG00000030016


Mus musculus

Features
Gene ID: ENSMUSG00000030016
  
Biological name :Zfp638
  
Synonyms : Q61464 / Zfp638 / zinc finger protein 638
  
Possible biological names infered from orthology : Q14966 / ZNF638
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: C3
Gene start: 83867109
Gene end: 83989550
  
Corresponding Affymetrix probe sets: 10539486 (MoGene1.0st)   1417791_a_at (Mouse Genome 430 2.0 Array)   1417792_at (Mouse Genome 430 2.0 Array)   1438593_at (Mouse Genome 430 2.0 Array)   1458523_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000109467
Ensembl peptide - ENSMUSP00000109466
Ensembl peptide - ENSMUSP00000144762
Ensembl peptide - ENSMUSP00000145513
Ensembl peptide - ENSMUSP00000145241
Ensembl peptide - ENSMUSP00000145170
Ensembl peptide - ENSMUSP00000145124
Ensembl peptide - ENSMUSP00000145047
Ensembl peptide - ENSMUSP00000144989
Ensembl peptide - ENSMUSP00000144939
Ensembl peptide - ENSMUSP00000032088
NCBI entrez gene - 18139     See in Manteia.
MGI - MGI:1203484
RefSeq - XM_017321438
RefSeq - XM_006505709
RefSeq - XM_006505710
RefSeq - XM_006505711
RefSeq - XM_006505712
RefSeq - XM_006505714
RefSeq - XM_011241247
RefSeq - XM_017321429
RefSeq - XM_017321430
RefSeq - XM_017321431
RefSeq - XM_017321432
RefSeq - XM_017321433
RefSeq - XM_017321434
RefSeq - XM_017321435
RefSeq - XM_017321437
RefSeq - NM_001166371
RefSeq - NM_008717
RefSeq - XM_006505704
RefSeq - XM_006505705
RefSeq - XM_006505706
RefSeq - XM_006505707
RefSeq - XM_006505708
RefSeq Peptide - NP_001342215
RefSeq Peptide - NP_032743
RefSeq Peptide - NP_001159843
swissprot - A0A0N4SVU0
swissprot - A0A0N4SVM8
swissprot - A0A0N4SVI8
swissprot - A0A0N4SV80
swissprot - A0A0N4SV38
swissprot - Q61464
swissprot - A0A0N4SUP3
swissprot - E9QML5
swissprot - Q3TZK9
swissprot - E9QKZ7
swissprot - A0A0N4SWG8
Ensembl - ENSMUSG00000030016
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-212k18.4ENSDARG00000104169Danio rerio
 Q14966ENSG00000075292Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000504  RNA recognition motif domain
 IPR000690  Matrin/U1-C, C2H2-type zinc finger
 IPR003604  Matrin/U1-C-like, C2H2-type zinc finger
 IPR013087  Zinc finger C2H2-type
 IPR033096  Zinc finger protein 638
 IPR035979  RNA-binding domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0008380 RNA splicing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0016607 nuclear speck IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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