ENSMUSG00000030654


Mus musculus

Features
Gene ID: ENSMUSG00000030654
  
Biological name :Arl6ip1
  
Synonyms : ADP-ribosylation factor-like protein 6-interacting protein 1 / Arl6ip1 / Q9JKW0
  
Possible biological names infered from orthology : AC138811.2 / ADP ribosylation factor like GTPase 6 interacting protein 1 / Q15041
  
Species: Mus musculus
  
Chr. number: 7
Strand: -1
Band: F1
Gene start: 118118891
Gene end: 118129662
  
Corresponding Affymetrix probe sets: 10567219 (MoGene1.0st)   1423818_a_at (Mouse Genome 430 2.0 Array)   1423819_s_at (Mouse Genome 430 2.0 Array)   1451131_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000032888
Ensembl peptide - ENSMUSP00000146175
Ensembl peptide - ENSMUSP00000145418
Ensembl peptide - ENSMUSP00000144894
NCBI entrez gene - 54208     See in Manteia.
MGI - MGI:1858943
RefSeq - NM_019419
RefSeq Peptide - NP_062292
swissprot - Q80ZW9
swissprot - A0A0U1RPY6
swissprot - Q9JKW0
swissprot - A0A0N4SW86
swissprot - A0A0N4SV01
Ensembl - ENSMUSG00000030654
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 AC138811.2ENSG00000260342Homo sapiens
 Q15041ENSG00000170540Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
P62245 / Rps15a / 40S ribosomal protein S15a / P62244* / ribosomal protein S15a*ENSMUSG0000000868310


Protein motifs (from Interpro)
Interpro ID Name
 IPR033301  ADP-ribosylation factor-like protein 6-interacting protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002038 positive regulation of L-glutamate import across plasma membrane IDA
 biological_processGO:0006613 cotranslational protein targeting to membrane IDA
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0043066 negative regulation of apoptotic process ISS
 biological_processGO:0043154 negative regulation of cysteine-type endopeptidase activity involved in apoptotic process ISS
 biological_processGO:0071787 endoplasmic reticulum tubular network formation ISO
 biological_processGO:1990809 endoplasmic reticulum tubular network membrane organization ISO
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005784 Sec61 translocon complex IDA
 cellular_componentGO:0005789 endoplasmic reticulum membrane ISO
 cellular_componentGO:0005829 cytosol IDA
 cellular_componentGO:0012505 endomembrane system IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0030176 integral component of endoplasmic reticulum membrane ISS
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001325 abnormal retina morphology "structural or developmental anomaly of the thin layer of neural tissue lining the back of the eyeball which contains visual receptors " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Apptm1b(KOMP)Wtsi/Apptm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Apptm1b(KOMP)Wtsi/Ics

 MP:0001399 hyperactivity "general restlessness or excessive movement; more frequent movement from one place to another" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:60409, J:57125]
Show

Allelic Composition: Apptm1b(KOMP)Wtsi/Apptm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Apptm1b(KOMP)Wtsi/Ics

 MP:0001406 abnormal gait "unusual or distinctive way of walking" [J:65038]
Show

Allelic Composition: Apptm1b(KOMP)Wtsi/Apptm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Apptm1b(KOMP)Wtsi/Ics

 MP:0001489 decreased startle reflex "greater threshold or less severe reflex response to variable stimuli, often auditory; usually measured by amplitude of whole body flinch" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator, What s Wrong With My Mouse?:ISBN 0-471-31639-3]
Show

Allelic Composition: Apptm1b(KOMP)Wtsi/Apptm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Apptm1b(KOMP)Wtsi/Ics

 MP:0001513 limb grasping "mice clasp front and/or hind feet almost immediately upon being lifted by tail" [cml:Cathleen M. Lutz , Mouse Genome Informatics Curator]
Show

Allelic Composition: Apptm1b(KOMP)Wtsi/Apptm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Apptm1b(KOMP)Wtsi/Ics

 MP:0002591 decreased mean corpuscular volume "less than the average amount of space occupied by each red blood cell, calculated from the hematocrit and red cell count, in erythrocyte indices" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Apptm1b(KOMP)Wtsi/Apptm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Apptm1b(KOMP)Wtsi/Ics

 MP:0004924 abnormal behavior "anomalies in the actions, reactions, or performance of an organism in response to external or internal stimuli compared to controls" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Apptm1b(KOMP)Wtsi/Apptm1b(KOMP)Wtsi
Genetic Background: C57BL/6N-Apptm1b(KOMP)Wtsi/Ics

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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