ENSMUSG00000030880


Mus musculus

Features
Gene ID: ENSMUSG00000030880
  
Biological name :Polr3e
  
Synonyms : DNA-directed RNA polymerase III subunit RPC5 / Polr3e / Q9CZT4
  
Possible biological names infered from orthology : Q9NVU0 / RNA polymerase III subunit E
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: F2
Gene start: 120917744
Gene end: 120947432
  
Corresponding Affymetrix probe sets: 10557035 (MoGene1.0st)   10557058 (MoGene1.0st)   1429456_a_at (Mouse Genome 430 2.0 Array)   1453147_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000033173
Ensembl peptide - ENSMUSP00000102092
Ensembl peptide - ENSMUSP00000146970
NCBI entrez gene - 26939     See in Manteia.
MGI - MGI:1349452
RefSeq - XM_017322284
RefSeq - NM_001164096
RefSeq - NM_025298
RefSeq - XM_006507887
RefSeq - XM_006507889
RefSeq - XM_006507890
RefSeq - XM_006507885
RefSeq Peptide - NP_079574
RefSeq Peptide - NP_001157568
swissprot - Q9CZT4
Ensembl - ENSMUSG00000030880
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 polr3eENSDARG00000037358Danio rerio
 POLR3EENSGALG00000007008Gallus gallus
 POLR3EENSG00000058600Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR006886  DNA-directed RNA polymerase III subunit Rpc5


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006383 transcription by RNA polymerase III IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0051607 defense response to virus IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005666 DNA-directed RNA polymerase III complex IEA
 molecular_functionGO:0001056 RNA polymerase III activity IBA
 molecular_functionGO:0003899 DNA-directed 5"-3" RNA polymerase activity IEA


Pathways (from Reactome)
Pathway description
RNA Polymerase III Transcription Initiation From Type 1 Promoter
RNA Polymerase III Transcription Initiation From Type 2 Promoter
RNA Polymerase III Transcription Initiation From Type 3 Promoter


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
 ENSMUSG00000000776 Polr3d / Q91WD1 / DNA-directed RNA polymerase III subunit RPC4 / P05423* / RNA polymerase III subunit D*  / complex






 

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