ENSMUSG00000031493


Mus musculus

Features
Gene ID: ENSMUSG00000031493
  
Biological name :Ggn
  
Synonyms : Ggn / Mus musculus gametotin (Ggn), transcript variant 4, mRNA. / Q80WJ1
  
Possible biological names infered from orthology : gametogenetin / Q86UU5
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: B1
Gene start: 29170210
Gene end: 29173976
  
Corresponding Affymetrix probe sets: 10551716 (MoGene1.0st)   1445278_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000033886
Ensembl peptide - ENSMUSP00000146620
Ensembl peptide - ENSMUSP00000146665
Ensembl peptide - ENSMUSP00000146750
Ensembl peptide - ENSMUSP00000096209
NCBI entrez gene - 243897     See in Manteia.
MGI - MGI:2181461
RefSeq - XM_006539946
RefSeq - NM_001358852
RefSeq - NM_182694
RefSeq - NM_182696
RefSeq - XM_006539944
RefSeq - XM_006539945
RefSeq Peptide - NP_874355
RefSeq Peptide - NP_874353
RefSeq Peptide - NP_001345781
swissprot - A0A140LI02
swissprot - A0A140LI42
swissprot - G5E8M4
swissprot - Q80WJ1
Ensembl - ENSMUSG00000031493
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 GGNENSG00000179168Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR031400  Gametogenetin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006302 double-strand break repair IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007276 gamete generation IEA
 biological_processGO:0007283 spermatogenesis IEA
 biological_processGO:0007566 embryo implantation IMP
 biological_processGO:0008104 protein localization IDA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0065003 protein-containing complex assembly NAS
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005635 nuclear envelope NAS
 cellular_componentGO:0005730 nucleolus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0016021 integral component of membrane NAS
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0031625 ubiquitin protein ligase binding IPI
 molecular_functionGO:0046983 protein dimerization activity IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0010948 abnormal double-strand DNA break repair "any annomaly in the process of repair of double-strand breaks in DNA via homologous and nonhomologous mechanisms to reform a continuous DNA helix" [GO:0006302]
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Allelic Composition: Tdp2tm1Huy/Tdp2tm1Huy
Genetic Background: involves: 129P2/OlaHsd * CD-1

 MP:0011094 complete embryonic lethality before implantation "death of all organisms of a given genotype in a population between fertilization and implantation (Mus: E0 to less than E4.5)" [MGI:csmith]
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Allelic Composition: Tdp2tm1Huy/Tdp2tm1Huy
Genetic Background: involves: 129P2/OlaHsd * CD-1

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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