ENSMUSG00000031881


Mus musculus

Features
Gene ID: ENSMUSG00000031881
  
Biological name :Cdh16
  
Synonyms : Cadherin-16 / Cdh16 / O88338
  
Possible biological names infered from orthology : O75309
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: D3
Gene start: 104601911
Gene end: 104624396
  
Corresponding Affymetrix probe sets: 10581132 (MoGene1.0st)   1448906_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000148337
Ensembl peptide - ENSMUSP00000148835
Ensembl peptide - ENSMUSP00000148809
Ensembl peptide - ENSMUSP00000148793
Ensembl peptide - ENSMUSP00000148726
Ensembl peptide - ENSMUSP00000148711
Ensembl peptide - ENSMUSP00000148701
Ensembl peptide - ENSMUSP00000148602
Ensembl peptide - ENSMUSP00000148491
Ensembl peptide - ENSMUSP00000148478
Ensembl peptide - ENSMUSP00000148363
Ensembl peptide - ENSMUSP00000129663
Ensembl peptide - ENSMUSP00000148269
NCBI entrez gene - 12556     See in Manteia.
MGI - MGI:106671
RefSeq - XM_006530629
RefSeq - NM_001252627
RefSeq - NM_001252628
RefSeq - NM_007663
RefSeq Peptide - NP_031689
RefSeq Peptide - NP_001239556
RefSeq Peptide - NP_001239557
swissprot - A0A1D5RLE7
swissprot - A0A1D5RL88
swissprot - A0A1D5RMK0
swissprot - Q546A8
swissprot - Q8C730
swissprot - A0A1D5RMM2
swissprot - O88338
swissprot - Q3TPA4
swissprot - A0A1D5RMI6
swissprot - A0A1D5RMB7
swissprot - A0A1D5RM27
swissprot - A0A1D5RMA8
swissprot - A0A1D5RLS8
swissprot - A0A1D5RLG9
Ensembl - ENSMUSG00000031881
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 cdh16ENSDARG00000077570Danio rerio
 CDH16ENSG00000166589Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Cdh17 / Q9R100 / Cadherin-17 / Q12864*ENSMUSG0000002821730


Protein motifs (from Interpro)
Interpro ID Name
 IPR002126  Cadherin
 IPR015919  Cadherin-like
 IPR030721  Cadherin-16


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007155 cell adhesion IEA
 biological_processGO:0007156 homophilic cell adhesion via plasma membrane adhesion molecules IEA
 biological_processGO:0007267 cell-cell signaling IBA
 biological_processGO:0007399 nervous system development IBA
 biological_processGO:0016339 calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules IEA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0005887 integral component of plasma membrane IBA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016323 basolateral plasma membrane IDA
 molecular_functionGO:0005509 calcium ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr