ENSMUSG00000032239


Mus musculus

Features
Gene ID: ENSMUSG00000032239
  
Biological name :Rp9
  
Synonyms : P97762 / retinitis pigmentosa 9 (human) / Rp9
  
Possible biological names infered from orthology : Q8TA86 / RP9, pre-mRNA splicing factor
  
Species: Mus musculus
  
Chr. number: 9
Strand: -1
Band: A3
Gene start: 22411047
Gene end: 22469743
  
Corresponding Affymetrix probe sets: 10591806 (MoGene1.0st)   1418277_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000150554
Ensembl peptide - ENSMUSP00000034763
Ensembl peptide - ENSMUSP00000150271
NCBI entrez gene - 55934     See in Manteia.
MGI - MGI:2157166
RefSeq - NM_018739
RefSeq Peptide - NP_061209
swissprot - A0A1L1SU01
swissprot - P97762
swissprot - Q3TH81
swissprot - Q3UGI5
Ensembl - ENSMUSG00000032239
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rp9ENSDARG00000098942Danio rerio
 RP9ENSGALG00000035453Gallus gallus
 RP9ENSG00000164610Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR032675  Leucine-rich repeat domain superfamily
 IPR034585  Retinitis pigmentosa 9 protein
 IPR036875  Zinc finger, CCHC-type superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008380 RNA splicing IEA
 biological_processGO:0050890 cognition IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005785 signal recognition particle receptor complex IDA
 cellular_componentGO:0005829 cytosol IEA
 cellular_componentGO:0016607 nuclear speck ISO
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008270 zinc ion binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr