ENSMUSG00000033454


Mus musculus

Features
Gene ID: ENSMUSG00000033454
  
Biological name :Zbtb1
  
Synonyms : Q91VL9 / Zbtb1 / zinc finger and BTB domain containing 1
  
Possible biological names infered from orthology : Q9Y2K1
  
Species: Mus musculus
  
Chr. number: 12
Strand: 1
Band: C3
Gene start: 76370266
Gene end: 76396950
  
Corresponding Affymetrix probe sets: 10396645 (MoGene1.0st)   1424750_at (Mouse Genome 430 2.0 Array)   1438110_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041955
NCBI entrez gene - 268564     See in Manteia.
MGI - MGI:2442326
RefSeq - XM_006515895
RefSeq - NM_178744
RefSeq Peptide - NP_848859
swissprot - Q5YB37
swissprot - Q91VL9
Ensembl - ENSMUSG00000033454
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 zbtb1ENSDARG00000023040Danio rerio
 ZBTB1ENSGALG00000011718Gallus gallus
 ZBTB1ENSG00000126804Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zbtb2 / zinc finger and BTB domain containing 2 / Q8N680*ENSMUSG000000753279
Zbtb25 / zinc finger and BTB domain containing 25 / P24278*ENSMUSG000000564597


Protein motifs (from Interpro)
Interpro ID Name
 IPR000210  BTB/POZ domain
 IPR011333  SKP1/BTB/POZ domain superfamily
 IPR013087  Zinc finger C2H2-type
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IEA
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0002711 positive regulation of T cell mediated immunity IDA
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006338 chromatin remodeling IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0019985 translesion synthesis IEA
 biological_processGO:0030154 cell differentiation IEA
 biological_processGO:0030183 B cell differentiation IMP
 biological_processGO:0032825 positive regulation of natural killer cell differentiation IMP
 biological_processGO:0033077 T cell differentiation in thymus IMP
 biological_processGO:0034644 cellular response to UV IEA
 biological_processGO:0042789 mRNA transcription by RNA polymerase II IEA
 biological_processGO:0045087 innate immune response IEA
 biological_processGO:0045582 positive regulation of T cell differentiation IMP
 biological_processGO:0048538 thymus development IMP
 biological_processGO:0051260 protein homooligomerization IEA
 biological_processGO:2000176 positive regulation of pro-T cell differentiation IMP
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005654 nucleoplasm ISS
 cellular_componentGO:0016604 nuclear body IEA
 cellular_componentGO:0031965 nuclear membrane IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003677 DNA binding IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042803 protein homodimerization activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0046982 protein heterodimerization activity IEA
 molecular_functionGO:0070530 K63-linked polyubiquitin modification-dependent protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000703 abnormal thymus morphology "anomalous structure or development of the primary lymphoid organ; required for immune system development" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:55400]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0001790 abnormal immune system physiology "deviation from the normal function of the immune system " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0001823 thymus hypoplasia "small size due to reduced cell number in the thymus" [J:23255]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0002144 abnormal B lymphocyte development "atypical production of or inability to produce mature B cells, and/or accumulation of B cell precursors" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0002145 abnormal T lymphocyte development "atypical production of or inability to produce mature T cells, and/or accumulation of T cell precursors" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0005014 increased B cell number "greater than normal B cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0005017 decreased B cell number "fewer than normal B cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0005018 decreased T cell number "fewer than normal T cell numbers" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0005092 decreased double-positive T cell count "less than the expected number of the subset of T cells found in the thymus that express both CD4 and CD8" [Immunobiology , The Immune System in Health and Disease:ISBN 0-8153-1691-7]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0008045 decreased NK cell number "reduction in the number of non-T, non-B lymphocytes, having a granular morphology and which are important in innate immunity to viruses and other intracellular pathogens; in addition, these cells can kill certain tumor cells" [ISBN:0-8153-1691-7 "Immunobiology, The Immune System in Health and Disease"]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0008070 absent T cells "absence of the lymphocytes that are responsible for cell-mediated immunity and immune system regulation" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0008075 decreased CD4-positive T cell number "reduced number of the subset of T lymphocytes that carry the CD4 marker, recognize intravesicular peptides bound to MHC class-II molecules, and turn on antibody production" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0008079 decreased CD8-positive T cell number "reduction in the number of the regulatory subset of T lymphocytes that are involved in MHC class I restricted interactions" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0008174 decreased follicular B cell number "reduced number of resting mature B cells with distinct phenotypic characteristics (CD23-positive, CD21-positive) found typically in the B cell follicle region of the spleen and lymph nodes" [CL:0000843, ISBN:0781735149, MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0008190 decreased transitional stage B cell number "reduced number of immature B cells of an intermediate stage between the pre-B cell stage and the mature naive stage; transitional B cells express surface immunoglobulin, and are subject to the process of B cell selection" [CL:0000818, ISBN:0781735149, MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0010132 decreased DN2 thymocyte number "reduced number of thymocytes that have the cell surface marker phenotype CD4-negative, CD8-negative, CD44-positive, and CD25-positive" [CL:0000806]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0010134 decreased DN3 thymocyte number "reduced number of thymocytes that have the cell surface marker phenotype CD4-negative, CD8-negative, CD44-positive, and CD25-negative and expressing the T cell receptor beta-chain in complex with the pre-T cell receptor alpha chain." [CL:0000807]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

 MP:0010136 decreased DN4 thymocyte number "reduced number of thymocytes that have the cell surface marker phenotype CD4-negative, CD8-negative, CD44-negative, CD25-negative, and pre-TCR-positive." [CL:0000808]
Show

Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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