ENSMUSG00000033545


Mus musculus

Features
Gene ID: ENSMUSG00000033545
  
Biological name :Znrf1
  
Synonyms : Q91V17 / zinc and ring finger 1 / Znrf1
  
Possible biological names infered from orthology : Q8ND25
  
Species: Mus musculus
  
Chr. number: 8
Strand: 1
Band: E1
Gene start: 111536097
Gene end: 111626030
  
Corresponding Affymetrix probe sets: 10575598 (MoGene1.0st)   1420949_at (Mouse Genome 430 2.0 Array)   1420950_at (Mouse Genome 430 2.0 Array)   1424384_a_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000134369
Ensembl peptide - ENSMUSP00000134232
Ensembl peptide - ENSMUSP00000134634
Ensembl peptide - ENSMUSP00000092799
Ensembl peptide - ENSMUSP00000126684
Ensembl peptide - ENSMUSP00000127956
Ensembl peptide - ENSMUSP00000132939
Ensembl peptide - ENSMUSP00000133309
Ensembl peptide - ENSMUSP00000133361
Ensembl peptide - ENSMUSP00000133455
Ensembl peptide - ENSMUSP00000133472
Ensembl peptide - ENSMUSP00000133519
Ensembl peptide - ENSMUSP00000133993
NCBI entrez gene - 170737     See in Manteia.
MGI - MGI:2177308
RefSeq - XM_017312588
RefSeq - NM_001168621
RefSeq - NM_001168622
RefSeq - NM_001168623
RefSeq - NM_133206
RefSeq - XM_006530731
RefSeq - XM_017312587
RefSeq Peptide - NP_001162093
RefSeq Peptide - NP_573469
RefSeq Peptide - NP_001162092
RefSeq Peptide - NP_001162094
swissprot - G3UWW9
swissprot - G3UWY5
swissprot - G3UYU9
swissprot - G3UZ70
swissprot - E9PZB7
swissprot - Q91V17
swissprot - E9PWL2
swissprot - G3UWN6
Ensembl - ENSMUSG00000033545
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 znrf1ENSDARG00000020475Danio rerio
 ZNRF1ENSGALG00000029017Gallus gallus
 ZNRF1ENSG00000186187Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Znrf2 / Q71FD5 / zinc and ring finger 2 / Q8NHG8*ENSMUSG0000005844640


Protein motifs (from Interpro)
Interpro ID Name
 IPR001841  Zinc finger, RING-type
 IPR013083  Zinc finger, RING/FYVE/PHD-type


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007010 cytoskeleton organization TAS
 biological_processGO:0016567 protein ubiquitination IEA
 biological_processGO:0043161 proteasome-mediated ubiquitin-dependent protein catabolic process IDA
 biological_processGO:0070936 protein K48-linked ubiquitination IDA
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0016020 membrane ISO
 cellular_componentGO:0030054 cell junction IEA
 cellular_componentGO:0030672 synaptic vesicle membrane IEA
 cellular_componentGO:0031410 cytoplasmic vesicle IEA
 cellular_componentGO:0045202 synapse IEA
 molecular_functionGO:0004842 ubiquitin-protein transferase activity IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0016740 transferase activity IEA
 molecular_functionGO:0046872 metal ion binding IEA
 molecular_functionGO:0061630 ubiquitin protein ligase activity ISO


Pathways (from Reactome)
Pathway description
Antigen processing: Ubiquitination & Proteasome degradation


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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