ENSMUSG00000033653


Mus musculus

Features
Gene ID: ENSMUSG00000033653
  
Biological name :Vps8
  
Synonyms : Q0P5W1 / Vps8 / VPS8 CORVET complex subunit
  
Possible biological names infered from orthology : Q8N3P4
  
Species: Mus musculus
  
Chr. number: 16
Strand: 1
Band: B1
Gene start: 21423118
Gene end: 21644680
  
Corresponding Affymetrix probe sets: 10434577 (MoGene1.0st)   1434050_at (Mouse Genome 430 2.0 Array)   1454810_s_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113447
Ensembl peptide - ENSMUSP00000112937
Ensembl peptide - ENSMUSP00000114139
Ensembl peptide - ENSMUSP00000119311
Ensembl peptide - ENSMUSP00000114719
Ensembl peptide - ENSMUSP00000093905
Ensembl peptide - ENSMUSP00000093906
Ensembl peptide - ENSMUSP00000111055
Ensembl peptide - ENSMUSP00000112622
Ensembl peptide - ENSMUSP00000112636
NCBI entrez gene - 209018     See in Manteia.
MGI - MGI:2146407
RefSeq - XM_006521956
RefSeq - NM_001081366
RefSeq - NM_001285893
RefSeq - NM_001285894
RefSeq - XM_006521953
RefSeq - XM_006521954
RefSeq - XM_006521955
RefSeq Peptide - NP_001272822
RefSeq Peptide - NP_001074835
RefSeq Peptide - NP_001272823
swissprot - D3Z5P1
swissprot - D3Z2G2
swissprot - F6ZLN8
swissprot - F7A250
swissprot - F8WI64
swissprot - D3YUP0
swissprot - Q0P5W1
swissprot - D3YU67
Ensembl - ENSMUSG00000033653
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 vps8ENSDARG00000060477Danio rerio
 VPS8ENSGALG00000006704Gallus gallus
 VPS8ENSG00000156931Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001680  WD40 repeat
 IPR001841  Zinc finger, RING-type
 IPR011044  Quinoprotein amine dehydrogenase, beta chain-like
 IPR011990  Tetratricopeptide-like helical domain superfamily
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR015943  WD40/YVTN repeat-like-containing domain superfamily
 IPR017986  WD40-repeat-containing domain
 IPR025941  Vacuolar protein sorting-associated protein 8, central domain
 IPR036322  WD40-repeat-containing domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0034058 endosomal vesicle fusion IEA
 cellular_componentGO:0005769 early endosome IEA
 cellular_componentGO:0033263 CORVET complex IDA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005515 protein binding IEA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

1 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr