ENSMUSG00000034252


Mus musculus

Features
Gene ID: ENSMUSG00000034252
  
Biological name :Senp6
  
Synonyms : Q6P7W0 / Senp6 / SUMO/sentrin specific peptidase 6
  
Possible biological names infered from orthology : Q9GZR1 / SUMO1/sentrin specific peptidase 6
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: E1
Gene start: 80066903
Gene end: 80144953
  
Corresponding Affymetrix probe sets: 10587419 (MoGene1.0st)   1427984_at (Mouse Genome 430 2.0 Array)   1445387_at (Mouse Genome 430 2.0 Array)   1452627_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000135719
Ensembl peptide - ENSMUSP00000047220
Ensembl peptide - ENSMUSP00000126777
Ensembl peptide - ENSMUSP00000128918
Ensembl peptide - ENSMUSP00000135108
Ensembl peptide - ENSMUSP00000135219
Ensembl peptide - ENSMUSP00000135401
Ensembl peptide - ENSMUSP00000135494
NCBI entrez gene - 215351     See in Manteia.
MGI - MGI:1922075
RefSeq - XM_006511017
RefSeq - NM_001311110
RefSeq - NM_146003
RefSeq - XM_006511014
RefSeq - XM_006511015
RefSeq - XM_006511016
RefSeq Peptide - NP_666115
RefSeq Peptide - NP_001298039
swissprot - H3BK20
swissprot - H3BKI2
swissprot - H3BKR4
swissprot - H3BLA9
swissprot - Q6P7W0
swissprot - H3BJS8
swissprot - F6Z9A1
Ensembl - ENSMUSG00000034252
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 senp6aENSDARG00000102923Danio rerio
 senp6bENSDARG00000079992Danio rerio
 SENP6ENSGALG00000015901Gallus gallus
 SENP6ENSG00000112701Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Senp7 / Q8BUH8 / SUMO1/sentrin specific peptidase 7 / Q9BQF6*ENSMUSG0000005291721


Protein motifs (from Interpro)
Interpro ID Name
 IPR003653  Ulp1 protease family, C-terminal catalytic domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0016925 protein sumoylation IEA
 biological_processGO:0016926 protein desumoylation IEA
 biological_processGO:0070646 protein modification by small protein removal IEA
 biological_processGO:0090169 regulation of spindle assembly IEA
 biological_processGO:0090234 regulation of kinetochore assembly IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0008233 peptidase activity IEA
 molecular_functionGO:0008234 cysteine-type peptidase activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0070139 SUMO-specific endopeptidase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0011091 complete prenatal lethality "death of all organisms of a given genotype in a population between fertilization and birth (Mus: approximately E18.5)" [MGI:csmith]
Show

Allelic Composition: Ndrg1tm1Hem/Ndrg1+
Genetic Background: involves: 129P2/Ola * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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