ENSMUSG00000035274


Mus musculus

Features
Gene ID: ENSMUSG00000035274
  
Biological name :Tpbg
  
Synonyms : Q9Z0L0 / Tpbg / Trophoblast glycoprotein
  
Possible biological names infered from orthology : Q13641
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: E3.1
Gene start: 85842380
Gene end: 85847040
  
Corresponding Affymetrix probe sets: 10587554 (MoGene1.0st)   1423310_at (Mouse Genome 430 2.0 Array)   1423311_s_at (Mouse Genome 430 2.0 Array)   1423312_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000006559
Ensembl peptide - ENSMUSP00000096101
NCBI entrez gene - 21983     See in Manteia.
MGI - MGI:1341264
RefSeq - XM_017313282
RefSeq - NM_001164792
RefSeq - NM_011627
RefSeq - XM_017313280
RefSeq - XM_017313281
RefSeq Peptide - NP_001158264
RefSeq Peptide - NP_035757
swissprot - Q9Z0L0
Ensembl - ENSMUSG00000035274
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 tpbgbENSDARG00000037186Danio rerio
 TPBGENSGALG00000027355Gallus gallus
 TPBGENSG00000146242Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Tpbgl / Q8C013 / Trophoblast glycoprotein-like / P0DKB5*ENSMUSG0000009660635


Protein motifs (from Interpro)
Interpro ID Name
 IPR000372  Leucine-rich repeat N-terminal domain
 IPR000483  Cysteine-rich flanking region, C-terminal
 IPR001611  Leucine-rich repeat
 IPR003591  Leucine-rich repeat, typical subtype
 IPR032675  Leucine-rich repeat domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051965 positive regulation of synapse assembly IDA
 cellular_componentGO:0005737 cytoplasm IDA
 cellular_componentGO:0005783 endoplasmic reticulum IDA
 cellular_componentGO:0005886 plasma membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001891 hydroencephaly "excessive accumulation of cerebrospinal fluid in the brain, especially the cerebral ventricles, often leading to increased brain size and other brain trauma" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, MeSH:National Library of Medicine - Medical Subject Headings, 2003]
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Allelic Composition: Esr1tm1Sakh/Esr1tm1Sakh,Tg(Wap-cre)11738Mam/?
Genetic Background: involves: 129P2/OlaHsd * C57BL/6 * SJL

 MP:0002083 premature death "death after 3 weeks of age, but before normal life span" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Esr1tm1Sakh/Esr1tm1Sakh,Tg(Wap-cre)11738Mam/?
Genetic Background: involves: 129P2/OlaHsd * C57BL/6 * SJL

 MP:0003091 abnormal cell migration "defect in the movement of cells during developmental processes" [smb:Susan M. Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Esr1tm1Sakh/Esr1tm1Sakh,Tg(Wap-cre)11738Mam/?
Genetic Background: involves: 129P2/OlaHsd * C57BL/6 * SJL

Allelic Composition: Tpbgtm1Plst/Tpbgtm1Plst
Genetic Background: involves: C57BL/6

 MP:0005076 abnormal cell differentiation "anomaly in the process whereby relatively unspecialized cells, e. g. embryonic or regenerative cells, acquire specialized structural and/or functional features that characterize the cells, tissues, or organs of the mature organism or some other relatively stable phase of the organism s life history" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Esr1tm1Sakh/Esr1tm1Sakh,Tg(Wap-cre)11738Mam/?
Genetic Background: involves: 129P2/OlaHsd * C57BL/6 * SJL

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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