ENSMUSG00000035378


Mus musculus

Features
Gene ID: ENSMUSG00000035378
  
Biological name :Shq1
  
Synonyms : Q7TMX5 / Shq1 / SHQ1, H/ACA ribonucleoprotein assembly factor
  
Possible biological names infered from orthology : Q6PI26
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: D3
Gene start: 100568256
Gene end: 100671157
  
Corresponding Affymetrix probe sets: 10546710 (MoGene1.0st)   1428927_at (Mouse Genome 430 2.0 Array)   1430933_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000086656
Ensembl peptide - ENSMUSP00000108938
Ensembl peptide - ENSMUSP00000127797
NCBI entrez gene - 72171     See in Manteia.
MGI - MGI:1919421
RefSeq - XM_006506670
RefSeq - NM_181590
RefSeq - XM_006506668
RefSeq - XM_006506669
RefSeq Peptide - NP_853621
swissprot - Q7TMX5
Ensembl - ENSMUSG00000035378
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 shq1ENSDARG00000058522Danio rerio
 SHQ1ENSGALG00000007798Gallus gallus
 SHQ1ENSG00000144736Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR007009  SHQ1 protein
 IPR007052  CS domain
 IPR008978  HSP20-like chaperone


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000493 box H/ACA snoRNP assembly IBA
 biological_processGO:0022618 ribonucleoprotein complex assembly IEA
 biological_processGO:0043065 positive regulation of apoptotic process IEA
 biological_processGO:1904874 positive regulation of telomerase RNA localization to Cajal body IEA
 biological_processGO:2000233 negative regulation of rRNA processing IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0051082 unfolded protein binding IBA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr