ENSMUSG00000035629


Mus musculus

Features
Gene ID: ENSMUSG00000035629
  
Biological name :Rubcn
  
Synonyms : Q80U62 / Rubcn / Run domain Beclin-1-interacting and cysteine-rich domain-containing protein
  
Possible biological names infered from orthology : Q92622 / RUN and cysteine rich domain containing beclin 1 interacting protein
  
Species: Mus musculus
  
Chr. number: 16
Strand: -1
Band: B3
Gene start: 32821703
Gene end: 32877766
  
Corresponding Affymetrix probe sets: 10439092 (MoGene1.0st)   1428243_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000048811
Ensembl peptide - ENSMUSP00000087114
Ensembl peptide - ENSMUSP00000110757
Ensembl peptide - ENSMUSP00000113087
NCBI entrez gene - 100502698     See in Manteia.
MGI - MGI:1915160
RefSeq - XM_006521655
RefSeq - NM_001200038
RefSeq - NM_172615
RefSeq - XM_006521652
RefSeq - XM_006521653
RefSeq Peptide - NP_001186967
RefSeq Peptide - NP_766203
swissprot - Q80U62
swissprot - D3Z7B1
Ensembl - ENSMUSG00000035629
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rubcnENSDARG00000078752Danio rerio
 RUBCNENSGALG00000007557Gallus gallus
 RUBCNENSG00000145016Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Rubcnl / RUN and cysteine rich domain containing beclin 1 interacting protein like / Q9H714*ENSMUSG0000003495923
Q7TSI1 / Plekhm1 / Pleckstrin homology domain-containing family M member 1 / Q9Y4G2* / pleckstrin homology and RUN domain containing M1*ENSMUSG0000003424716
Q8BM47 / Plekhm3 / Pleckstrin homology domain-containing family M member 3 / Q6ZWE6* / pleckstrin homology domain containing M3*ENSMUSG0000005134413
Def8 / Q99J78 / Differentially expressed in FDCP 8 / Q6ZN54* / differentially expressed in FDCP 8 homolog*ENSMUSG0000000148210


Protein motifs (from Interpro)
Interpro ID Name
 IPR004012  RUN domain
 IPR025258  Putative zinc-RING and/or ribbon
 IPR037213  RUN domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002376 immune system process IEA
 biological_processGO:0006897 endocytosis IEA
 biological_processGO:0006914 autophagy IEA
 biological_processGO:0010507 negative regulation of autophagy ISO
 biological_processGO:0043553 negative regulation of phosphatidylinositol 3-kinase activity ISO
 biological_processGO:0045806 negative regulation of endocytosis ISO
 biological_processGO:1901097 negative regulation of autophagosome maturation ISO
 cellular_componentGO:0005654 nucleoplasm ISO
 cellular_componentGO:0005764 lysosome IEA
 cellular_componentGO:0005768 endosome IEA
 cellular_componentGO:0005769 early endosome ISO
 cellular_componentGO:0005770 late endosome IEA
 cellular_componentGO:0005829 cytosol ISO
 cellular_componentGO:0043231 intracellular membrane-bounded organelle ISO
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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