ENSMUSG00000035840


Mus musculus

Features
Gene ID: ENSMUSG00000035840
  
Biological name :Lysmd3
  
Synonyms : LysM and putative peptidoglycan-binding domain-containing protein 3 / Lysmd3 / Q99LE3
  
Possible biological names infered from orthology : LysM domain containing 3 / Q7Z3D4
  
Species: Mus musculus
  
Chr. number: 13
Strand: 1
Band: C3
Gene start: 81657663
Gene end: 81672871
  
Corresponding Affymetrix probe sets: 10406419 (MoGene1.0st)   1434174_at (Mouse Genome 430 2.0 Array)   1460335_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000038275
Ensembl peptide - ENSMUSP00000153026
Ensembl peptide - ENSMUSP00000152945
Ensembl peptide - ENSMUSP00000152940
NCBI entrez gene - 80289     See in Manteia.
MGI - MGI:1915906
RefSeq - XM_006517475
RefSeq - NM_030257
RefSeq Peptide - NP_084533
swissprot - A0A286YCK3
swissprot - A0A2C9F2A6
swissprot - Q99LE3
swissprot - A0A286YCE3
Ensembl - ENSMUSG00000035840
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 lysmd3ENSDARG00000024693Danio rerio
 LYSMD3ENSGALG00000014651Gallus gallus
 LYSMD3ENSG00000176018Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Lysmd4 / Q8CC84 / Mus musculus LysM, putative peptidoglycan-binding, domain containing 4 (Lysmd4), transcript variant E, mRNA. / Q5XG99* / LysM domain containing 4*ENSMUSG0000004383128


Protein motifs (from Interpro)
Interpro ID Name
 IPR018392  LysM domain
 IPR036779  LysM domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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