ENSMUSG00000036501


Mus musculus

Features
Gene ID: ENSMUSG00000036501
  
Biological name :Fam13b
  
Synonyms : Fam13b / Protein FAM13B / Q8K2H3
  
Possible biological names infered from orthology : family with sequence similarity 13 member B / Q9NYF5
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: B1
Gene start: 34442352
Gene end: 34506823
  
Corresponding Affymetrix probe sets: 10458098 (MoGene1.0st)   1434620_s_at (Mouse Genome 430 2.0 Array)   1442897_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000038199
NCBI entrez gene - 225358     See in Manteia.
MGI - MGI:2447834
RefSeq - XM_017317886
RefSeq - NM_146084
RefSeq - XM_006525854
RefSeq - XM_006525855
RefSeq - XM_006525848
RefSeq - XM_006525849
RefSeq - XM_006525850
RefSeq - XM_006525851
RefSeq - XM_006525852
RefSeq - XM_006525853
RefSeq Peptide - NP_666196
swissprot - Q8K2H3
Ensembl - ENSMUSG00000036501
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fam13bENSDARG00000076779Danio rerio
 FAM13BENSGALG00000041706Gallus gallus
 FAM13BENSG00000031003Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Fam13a / Q8BGI4 / Protein FAM13A / O94988* / family with sequence similarity 13 member A*ENSMUSG0000003770928
Fam13c / Q9DBR2 / Protein FAM13C / Q8NE31* / family with sequence similarity 13 member C*ENSMUSG0000004325919


Protein motifs (from Interpro)
Interpro ID Name
 IPR000198  Rho GTPase-activating protein domain
 IPR008936  Rho GTPase activation protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007165 signal transduction IEA
 biological_processGO:0043547 positive regulation of GTPase activity IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005096 GTPase activator activity IEA


Pathways (from Reactome)
Pathway description
Rho GTPase cycle


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001697 abnormal embryo size "anomalous proportions of embryo compared to littermates" [cwg:Carroll W. Goldsmith, Mouse Genome Informatics Curator]
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Allelic Composition: Dbn1tm1b(KOMP)Wtsi/Dbn1+
Genetic Background: C57BL/6N-Dbn1tm1b(KOMP)Wtsi/Bay

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
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Allelic Composition: Faddtm1e.1(KOMP)Wtsi/Faddtm1e.1(KOMP)Wtsi
Genetic Background: C57BL/6N-Faddtm1e.1(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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