ENSMUSG00000036941


Mus musculus

Features
Gene ID: ENSMUSG00000036941
  
Biological name :Elac1
  
Synonyms : Elac1 / Q8VEB6 / Zinc phosphodiesterase ELAC protein 1
  
Possible biological names infered from orthology : elaC ribonuclease Z 1 / Q9H777
  
Species: Mus musculus
  
Chr. number: 18
Strand: -1
Band: E2
Gene start: 73735038
Gene end: 73754479
  
Corresponding Affymetrix probe sets: 10459723 (MoGene1.0st)   1419228_at (Mouse Genome 430 2.0 Array)   1421417_s_at (Mouse Genome 430 2.0 Array)   1453061_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041793
NCBI entrez gene - 114615     See in Manteia.
MGI - MGI:1890495
RefSeq - NM_053255
RefSeq Peptide - NP_444485
swissprot - Q8VEB6
Ensembl - ENSMUSG00000036941
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 elac1ENSDARG00000045095Danio rerio
 ELAC1ENSG00000141642Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001279  Metallo-beta-lactamase
 IPR013471  Ribonuclease Z/BN
 IPR036866  Ribonuclease Z/Hydroxyacylglutathione hydrolase-like


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0034414 tRNA 3"-trailer cleavage, endonucleolytic IEA
 biological_processGO:0042779 tRNA 3"-trailer cleavage IEA
 biological_processGO:0090502 RNA phosphodiester bond hydrolysis, endonucleolytic IEA
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005829 cytosol ISS
 molecular_functionGO:0004518 nuclease activity IEA
 molecular_functionGO:0004519 endonuclease activity IEA
 molecular_functionGO:0016787 hydrolase activity IEA
 molecular_functionGO:0016891 endoribonuclease activity, producing 5"-phosphomonoesters IEA
 molecular_functionGO:0042781 3"-tRNA processing endoribonuclease activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
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Allelic Composition: Skor2Tn(sb-Tyr)1799B.CA3Ove/Skor2Tn(sb-Tyr)1799B.CA3Ove
Genetic Background: involves: FVB/N

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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