ENSMUSG00000037979


Mus musculus

Features
Gene ID: ENSMUSG00000037979
  
Biological name :Ccdc92
  
Synonyms : Ccdc92 / Coiled-coil domain-containing protein 92 / Q8VDN4
  
Possible biological names infered from orthology : coiled-coil domain containing 92 / Q53HC0
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: F
Gene start: 124834418
Gene end: 124862424
  
Corresponding Affymetrix probe sets: 10533869 (MoGene1.0st)   1451395_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000038075
Ensembl peptide - ENSMUSP00000119438
Ensembl peptide - ENSMUSP00000114983
NCBI entrez gene - 215707     See in Manteia.
MGI - MGI:106485
RefSeq - NM_144819
RefSeq - XM_006504287
RefSeq Peptide - NP_659068
swissprot - D6RJ58
swissprot - Q8VDN4
swissprot - D3YUR9
Ensembl - ENSMUSG00000037979
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ccdc92ENSDARG00000041750Danio rerio
 CCDC92ENSGALG00000003146Gallus gallus
 CCDC92ENSG00000119242Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Ccdc92b / coiled-coil domain containing 92BENSMUSG0000006981425


Protein motifs (from Interpro)
Interpro ID Name
 IPR033224  Coiled-coil domain-containing protein 92


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IEA
 cellular_componentGO:0005814 centriole IBA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0043231 intracellular membrane-bounded organelle IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0002942 decreased circulating alanine transaminase level "decreased concentration in the blood of this enzyme, which transfers amino groups from l-alanine to 2 ketoglutarate, or the reverse (from l-glutamate to pyruvate); serum concentration is increased in viral hepatitis and myocardial infarction" [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
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Allelic Composition: Casq2tm1b(KOMP)Wtsi/Casq2+
Genetic Background: C57BL/6N-Casq2tm1b(KOMP)Wtsi/Ucd

 MP:0005179 decreased total circulating cholesterol level "less than the normal concentration in the blood of these most abundant steroids in animal tissues, and precursors to steroid hormones and bile salts; also components of plasma membranes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Casq2tm1b(KOMP)Wtsi/Casq2+
Genetic Background: C57BL/6N-Casq2tm1b(KOMP)Wtsi/Ucd

 MP:0010053 decreased grip strength "reduced ability to grasp and hold objects, often measured as time spent hanging from an object or wire" [ISBN:0471316393 "Crawley, JN, What s Wrong with my Mouse: Behavioral Phenotyping of Transgenic and Knockout Mice"]
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Allelic Composition: Casq2tm1b(KOMP)Wtsi/Casq2+
Genetic Background: C57BL/6N-Casq2tm1b(KOMP)Wtsi/Ucd

 MP:0011967 increased or absent threshold for auditory brainstem response "increase in the value at which one or more sound frequencies or broadband clicks first elicits a recordable response generated by electrical activity of neurons in the ascending auditory system, or complete lack of a recordable response at any frequency or broadband click" [MGI:csmith]
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Allelic Composition: Casq2tm1b(KOMP)Wtsi/Casq2+
Genetic Background: C57BL/6N-Casq2tm1b(KOMP)Wtsi/Ucd

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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