ENSMUSG00000038271


Mus musculus

Features
Gene ID: ENSMUSG00000038271
  
Biological name :Iffo1
  
Synonyms : Iffo1 / Intermediate filament family orphan 1 / Q8BXL9
  
Possible biological names infered from orthology : Q0D2I5
  
Species: Mus musculus
  
Chr. number: 6
Strand: 1
Band: F2
Gene start: 125145241
Gene end: 125161782
  
Corresponding Affymetrix probe sets: 10541862 (MoGene1.0st)   1447826_x_at (Mouse Genome 430 2.0 Array)   1454628_at (Mouse Genome 430 2.0 Array)   1454629_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000113088
Ensembl peptide - ENSMUSP00000113376
Ensembl peptide - ENSMUSP00000115080
Ensembl peptide - ENSMUSP00000116701
NCBI entrez gene - 320678     See in Manteia.
MGI - MGI:2444516
RefSeq - XM_006506283
RefSeq - NM_178787
RefSeq - XM_006506274
RefSeq - XM_006506275
RefSeq - XM_006506278
RefSeq - XM_006506279
RefSeq - XM_006506280
RefSeq - XM_006506281
RefSeq - NM_001039669
RefSeq - NM_001302778
RefSeq - NM_001302779
RefSeq Peptide - NP_848902
RefSeq Peptide - NP_001034758
RefSeq Peptide - NP_001289707
RefSeq Peptide - NP_001289708
swissprot - Q8BXL9
swissprot - F6VMG1
swissprot - D6RH90
Ensembl - ENSMUSG00000038271
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 iffo1aENSDARG00000062976Danio rerio
 iffo1bENSDARG00000062108Danio rerio
 IFFO1ENSGALG00000014443Gallus gallus
 IFFO1ENSG00000010295Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Iffo2 / Q8R2V2 / Intermediate filament family orphan 2 / Q5TF58* / AL080251.1*ENSMUSG0000004102551
Gm21969 / IFFO2* / Q5TF58* / AL080251.1* / intermediate filament family orphan 2*ENSMUSG0000009443932


Protein motifs (from Interpro)
Interpro ID Name
 IPR001664  Intermediate filament protein


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005882 intermediate filament IEA
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0005198 structural molecule activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr