ENSMUSG00000038630


Mus musculus

Features
Gene ID: ENSMUSG00000038630
  
Biological name :Zkscan16
  
Synonyms : zinc finger with KRAB and SCAN domains 16 / Zkscan16
  
Possible biological names infered from orthology : Q8TF39 / zinc finger protein 483 / ZNF483
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: B3
Gene start: 58943628
Gene end: 58958355
  
Corresponding Affymetrix probe sets: 10505163 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000103178
NCBI entrez gene - 100041581     See in Manteia.
MGI - MGI:3510405
RefSeq - XM_011249892
RefSeq - NM_001099323
RefSeq - XM_006537508
RefSeq Peptide - NP_001342337
RefSeq Peptide - NP_001092793
swissprot - A2ALW2
Ensembl - ENSMUSG00000038630
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 Q8TF39ENSG00000173258Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zfp110 / zinc finger protein 110 / Q96GC6* / ZNF274* / zinc finger protein 274*ENSMUSG0000005863823
Zfp369 / zinc finger protein 369 / Q96GC6* / ZNF274* / zinc finger protein 274*ENSMUSG0000002151423


Protein motifs (from Interpro)
Interpro ID Name
 IPR001909  Krueppel-associated box
 IPR003309  SCAN domain
 IPR008916  Retrovirus capsid, C-terminal
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR013087  Zinc finger C2H2-type
 IPR029037  YfgJ-like
 IPR036051  KRAB domain superfamily
 IPR036236  Zinc finger C2H2 superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IBA
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005622 intracellular IEA
 cellular_componentGO:0005634 nucleus IEA
 molecular_functionGO:0003676 nucleic acid binding IEA
 molecular_functionGO:0003700 DNA-binding transcription factor activity IBA
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
Generic Transcription Pathway


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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