ENSMUSG00000038888


Mus musculus

Features
Gene ID: ENSMUSG00000038888
  
Biological name :Ctu1
  
Synonyms : Ctu1 / Cytoplasmic tRNA 2-thiolation protein 1 / Q99J10
  
Possible biological names infered from orthology : cytosolic thiouridylase subunit 1 / Q7Z7A3
  
Species: Mus musculus
  
Chr. number: 7
Strand: 1
Band: B3
Gene start: 43672016
Gene end: 43678298
  
Corresponding Affymetrix probe sets: 10552458 (MoGene1.0st)   1424023_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000036770
NCBI entrez gene - 233189     See in Manteia.
MGI - MGI:2385277
RefSeq - NM_145582
RefSeq - XM_017322170
RefSeq Peptide - NP_663557
swissprot - Q99J10
Ensembl - ENSMUSG00000038888
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 ctu1ENSDARG00000020986Danio rerio
 CTU1ENSG00000142544Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR000541  Cytoplasmic tRNA 2-thiolation protein 1
 IPR011063  tRNA(Ile)-lysidine/2-thiocytidine synthase, N-terminal
 IPR014729  Rossmann-like alpha/beta/alpha sandwich fold
 IPR032442  Cytoplasmic tRNA 2-thiolation protein 1, C-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002098 tRNA wobble uridine modification ISS
 biological_processGO:0008033 tRNA processing IEA
 biological_processGO:0008150 biological_process ND
 biological_processGO:0034227 tRNA thio-modification ISS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion IDA
 cellular_componentGO:0005829 cytosol ISS
 molecular_functionGO:0000049 tRNA binding ISS
 molecular_functionGO:0003674 molecular_function ND
 molecular_functionGO:0003723 RNA binding IEA
 molecular_functionGO:0016740 transferase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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