ENSMUSG00000039539


Mus musculus

Features
Gene ID: ENSMUSG00000039539
  
Biological name :Sgcz
  
Synonyms : Q8BX51 / Sgcz / Zeta-sarcoglycan
  
Possible biological names infered from orthology : Q96LD1 / sarcoglycan zeta
  
Species: Mus musculus
  
Chr. number: 8
Strand: -1
Band: A4
Gene start: 37522298
Gene end: 38661508
  
Corresponding Affymetrix probe sets: 10578253 (MoGene1.0st)   
  
Cross references: Ensembl peptide - ENSMUSP00000113912
Ensembl peptide - ENSMUSP00000117250
NCBI entrez gene - 244431     See in Manteia.
MGI - MGI:2388820
RefSeq - XM_011242138
RefSeq - NM_145841
RefSeq - XM_006509120
RefSeq - XM_006509122
RefSeq Peptide - NP_665840
swissprot - D6RFA5
swissprot - Q8BX51
Ensembl - ENSMUSG00000039539
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SGCZENSDARG00000106258Danio rerio
 SGCZENSGALG00000013684Gallus gallus
 SGCZENSG00000185053Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Sgcd / P82347 / sarcoglycan, delta (dystrophin-associated glycoprotein) / Q92629* / sarcoglycan delta*ENSMUSG0000002035454
Sgcg / P82348 / sarcoglycan, gamma (dystrophin-associated glycoprotein) / Q13326* / sarcoglycan gamma*ENSMUSG0000003529652


Protein motifs (from Interpro)
Interpro ID Name
 IPR006875  Sarcoglycan complex subunit protein
 IPR027662  Zeta-sarcoglycan


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007517 muscle organ development IBA
 biological_processGO:0048738 cardiac muscle tissue development IBA
 biological_processGO:0055001 muscle cell development IBA
 biological_processGO:0060047 heart contraction IBA
 biological_processGO:0061024 membrane organization TAS
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0005886 plasma membrane IDA
 cellular_componentGO:0016012 sarcoglycan complex IDA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0042383 sarcolemma IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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