ENSMUSG00000039917


Mus musculus

Features
Gene ID: ENSMUSG00000039917
  
Biological name :Rhbdd2
  
Synonyms : Mus musculus rhomboid domain containing 2 (Rhbdd2), transcript variant 2, mRNA. / Q8VEK2 / Rhbdd2
  
Possible biological names infered from orthology : Q6NTF9 / rhomboid domain containing 2
  
Species: Mus musculus
  
Chr. number: 5
Strand: 1
Band: G2
Gene start: 135632618
Gene end: 135646448
  
Corresponding Affymetrix probe sets: 10526356 (MoGene1.0st)   1426443_at (Mouse Genome 430 2.0 Array)   1426444_at (Mouse Genome 430 2.0 Array)   1438163_x_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000143780
Ensembl peptide - ENSMUSP00000049060
Ensembl peptide - ENSMUSP00000119069
NCBI entrez gene - 215160     See in Manteia.
MGI - MGI:1915612
RefSeq - XM_017320790
RefSeq - NM_001357037
RefSeq - NM_146002
RefSeq - XM_006504416
RefSeq Peptide - NP_001343966
RefSeq Peptide - NP_666114
swissprot - D6RCZ4
swissprot - Q8VEK2
swissprot - A0A0G2JH08
Ensembl - ENSMUSG00000039917
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 rhbdd2ENSDARG00000092463Danio rerio
 RHBDD2ENSGALG00000035035Gallus gallus
 Q6NTF9ENSG00000005486Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR022764  Peptidase S54, rhomboid domain
 IPR035952  Rhomboid-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006508 proteolysis IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0000139 Golgi membrane IDA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005654 nucleoplasm IEA
 cellular_componentGO:0005794 Golgi apparatus ISO
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0048471 perinuclear region of cytoplasm IDA
 molecular_functionGO:0004252 serine-type endopeptidase activity IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr