ENSMUSG00000039985


Mus musculus

Features
Gene ID: ENSMUSG00000039985
  
Biological name :Fam60a
  
Synonyms : Fam60a / Mus musculus family with sequence similarity 60, member A (Fam60a), transcript variant 2, mRNA. / Q8C8M1
  
Possible biological names infered from orthology : Q9NP50 / SIN3-HDAC complex associated factor / SINHCAF
  
Species: Mus musculus
  
Chr. number: 6
Strand: -1
Band: G3
Gene start: 148921035
Gene end: 148946467
  
Corresponding Affymetrix probe sets: 10436442 (MoGene1.0st)   10549497 (MoGene1.0st)   1448126_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000117859
Ensembl peptide - ENSMUSP00000145496
Ensembl peptide - ENSMUSP00000145487
Ensembl peptide - ENSMUSP00000145423
Ensembl peptide - ENSMUSP00000145370
Ensembl peptide - ENSMUSP00000119540
Ensembl peptide - ENSMUSP00000050952
Ensembl peptide - ENSMUSP00000107187
Ensembl peptide - ENSMUSP00000107188
Ensembl peptide - ENSMUSP00000115417
NCBI entrez gene - 56306     See in Manteia.
MGI - MGI:1929091
RefSeq - XM_006507075
RefSeq - NM_001355645
RefSeq - NM_019643
RefSeq - XM_006507073
RefSeq - XM_006507074
RefSeq Peptide - NP_001342574
RefSeq Peptide - NP_062617
swissprot - D3YVY1
swissprot - A0A0N4SW91
swissprot - A0A0N4SW48
swissprot - Q8C8M1
swissprot - D3Z0C1
swissprot - D3Z1Z9
Ensembl - ENSMUSG00000039985
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 sinhcafENSDARG00000032653Danio rerio
 SINHCAFENSGALG00000012946Gallus gallus
 Q9NP50ENSG00000139146Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR026065  SIN3-HDAC complex-associated factor


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008284 positive regulation of cell proliferation IMP
 biological_processGO:0030336 negative regulation of cell migration ISS
 biological_processGO:0045596 negative regulation of cell differentiation IMP
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0016580 Sin3 complex IBA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr