ENSMUSG00000040312


Mus musculus

Features
Gene ID: ENSMUSG00000040312
  
Biological name :Cchcr1
  
Synonyms : Cchcr1 / Coiled-coil alpha-helical rod protein 1 / Q8K2I2
  
Possible biological names infered from orthology : Q8TD31
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: B1
Gene start: 35517100
Gene end: 35531015
  
Corresponding Affymetrix probe sets: 10444858 (MoGene1.0st)   1435406_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000046612
Ensembl peptide - ENSMUSP00000132028
Ensembl peptide - ENSMUSP00000133407
NCBI entrez gene - 240084     See in Manteia.
MGI - MGI:2385321
RefSeq - XM_011246455
RefSeq - NM_146248
RefSeq - XM_011246451
RefSeq - XM_011246452
RefSeq - XM_011246454
RefSeq - XM_011246445
RefSeq - XM_011246446
RefSeq - XM_011246447
RefSeq - XM_011246448
RefSeq - XM_011246449
RefSeq - XM_011246450
RefSeq Peptide - NP_666360
swissprot - Q8K2I2
swissprot - G3UWS7
Ensembl - ENSMUSG00000040312
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:dkeyp-20g2.1ENSDARG00000092464Danio rerio
 si:dkeyp-20g2.3ENSDARG00000094279Danio rerio
 si:dkeyp-20g2.3ENSDARG00000093389Danio rerio
 CCHCR1ENSG00000204536Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR009800  Coiled-coil alpha-helical rod protein 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006611 protein export from nucleus IDA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0030154 cell differentiation IEA
 cellular_componentGO:0005634 nucleus IEA
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005814 centriole IEA
 cellular_componentGO:0005829 cytosol IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0042802 identical protein binding ISO


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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contact: otassy@igbmc.fr