ENSMUSG00000040483


Mus musculus

Features
Gene ID: ENSMUSG00000040483
  
Biological name :Xaf1
  
Synonyms : Q5NBU8 / Xaf1 / XIAP associated factor 1
  
Possible biological names infered from orthology : Q6GPH4
  
Species: Mus musculus
  
Chr. number: 11
Strand: 1
Band: B4
Gene start: 72301629
Gene end: 72313733
  
Corresponding Affymetrix probe sets: 10378068 (MoGene1.0st)   1443621_at (Mouse Genome 430 2.0 Array)   1443698_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000121483
Ensembl peptide - ENSMUSP00000123011
Ensembl peptide - ENSMUSP00000091583
Ensembl peptide - ENSMUSP00000121472
NCBI entrez gene - 327959     See in Manteia.
MGI - MGI:3772572
RefSeq - XM_006533569
RefSeq - XM_006533567
RefSeq - XM_006533570
RefSeq - XM_017314614
RefSeq - NM_001037713
RefSeq - NM_001291153
RefSeq - XM_017314613
RefSeq Peptide - NP_001032802
RefSeq Peptide - NP_001278082
swissprot - Q5NBU8
swissprot - F6ZMN8
swissprot - Z4YN17
Ensembl - ENSMUSG00000040483
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 xaf1ENSDARG00000068939Danio rerio
 XAF1ENSGALG00000005928Gallus gallus
 XAF1ENSG00000132530Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Q3UDK1 / Trafd1 / TRAF-type zinc finger domain-containing protein 1 / O14545* / TRAF-type zinc finger domain containing 1*ENSMUSG0000004272623


Protein motifs (from Interpro)
Interpro ID Name
 IPR013083  Zinc finger, RING/FYVE/PHD-type
 IPR031220  XIAP-associated factor 1


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006915 apoptotic process IEA
 biological_processGO:0034097 response to cytokine IBA
 biological_processGO:0035456 response to interferon-beta ISO
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005739 mitochondrion ISO
 molecular_functionGO:0046872 metal ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr