ENSMUSG00000040726


Mus musculus

Features
Gene ID: ENSMUSG00000040726
  
Biological name :Hesx1
  
Synonyms : Hesx1 / Homeobox expressed in ES cells 1 / Q61658
  
Possible biological names infered from orthology : HESX homeobox 1 / Q9UBX0
  
Species: Mus musculus
  
Chr. number: 14
Strand: 1
Band: A3
Gene start: 26994416
Gene end: 27002329
  
Corresponding Affymetrix probe sets: 10413393 (MoGene1.0st)   1420604_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041999
Ensembl peptide - ENSMUSP00000152952
NCBI entrez gene - 15209     See in Manteia.
MGI - MGI:96071
RefSeq - XM_006518570
RefSeq - NM_010420
RefSeq Peptide - NP_034550
swissprot - Q61658
Ensembl - ENSMUSG00000040726
  

This gene has been taged as a transcription factor by TFT
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 HESX1ENSGALG00000005506Gallus gallus
 HESX1ENSG00000163666Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR001356  Homeobox domain
 IPR009057  Homeobox-like domain superfamily
 IPR017970  Homeobox, conserved site


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0000122 negative regulation of transcription by RNA polymerase II IDA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0007275 multicellular organism development IEA
 biological_processGO:0007420 brain development IMP
 biological_processGO:0021983 pituitary gland development IEA
 biological_processGO:0030916 otic vesicle formation IMP
 biological_processGO:0043584 nose development IMP
 biological_processGO:0045892 negative regulation of transcription, DNA-templated IDA
 biological_processGO:0048853 forebrain morphogenesis IMP
 cellular_componentGO:0005634 nucleus ISO
 molecular_functionGO:0000978 RNA polymerase II proximal promoter sequence-specific DNA binding IEA
 molecular_functionGO:0001078 transcriptional repressor activity, RNA polymerase II proximal promoter sequence-specific DNA binding IDA
 molecular_functionGO:0003677 DNA binding ISO
 molecular_functionGO:0003682 chromatin binding IDA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0008022 protein C-terminus binding IPI
 molecular_functionGO:0008134 transcription factor binding NAS
 molecular_functionGO:0043565 sequence-specific DNA binding IEA
 molecular_functionGO:0047485 protein N-terminus binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000428 abnormal craniofacial morphology "anomalous structure or development of the face and/or cranium" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm1Icar/Hesx1+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm2Jpmb/Hesx1tm2Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0000433 microcephaly "an abnormally small head" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000445 short snout "reduced length of the anterior facial part of the muzzle" [J:53370]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000633 abnormal pituitary gland morphology "anomalous structure of the compound gland suspended from the base of the hypothalamus, which secretes somatotropins, prolactin, TSH (thyroid-stimulating hormone), gonadotropins, adrenal corticotropin" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Hesx1tm1Icar/Hesx1tm2Jpmb
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * C57BL/6 * FVB/N

 MP:0000780 abnormal corpus callosum morphology "malformation or absence of a thick bundle of nerve fibers comprising a commissural plate connecting the two cerebral hemispheres; it consists of contralateral axon projections that provides communications between the right and left cerebral hemispheres" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0000783 abnormal forebrain morphology "malformed or absent anterior primitive cerebral vesicle; most rostral of three primary vesicles of the embryonic neural tube" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:38857]
Show

Allelic Composition: Hesx1tm1Icar/Hesx1+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

Allelic Composition: Hesx1tm1Icar/Hesx1tm3Jpmb
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * C57BL/6 * FVB/N

 MP:0000787 abnormal telencephalon morphology "any malformation or absence of the paired anteriolateral division of the prosencephalon plus the lamina terminalis from which the olfactory lobes, cerebral cortex, and subcortical nuclei are derived " [MeSH:National Library of Medicine - Medical Subject Headings , 2003, Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0000837 abnormal hypothalamus morphology "any malformation or absence of the ventral part of the diencephalon extending from the region of the optic chiasm to the caudal border of the mammillary bodies and forming the inferior and lateral walls of the third ventricle; this region regulates the autonomic nervous system via hormone production and release" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0000934 abnormal telencephalon development "malformed or incomplete differentiation of the anterior division of the embryonic prosencephalon " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:49840]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: B6.129S-Hesx1tm1(cre)Jpmb

Allelic Composition: Gt(ROSA)26Sortm1Sor/Gt(ROSA)26Sor+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * C57BL/6

Allelic Composition: Hesx1tm1Icar/Hesx1tm2Jpmb
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * C57BL/6 * FVB/N

 MP:0000936 small telencephalic vesicles "reduced size of the paired diverticula of the telencephalon, from which the forebrain develops" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CLS, J:49840]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm1Icar/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

Allelic Composition: Hesx1tm4.1Jpmb/Hesx1tm4.1Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6 * C57BL/6J * SJL

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: involves: 129S/SvEv

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv

Allelic Composition: Hesx1tm1Icar/Hesx1+,Tcf7l1tm2Efu/Tcf7l1+
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1+,Tcf7l1tm1Efu/Tcf7l1tm2Efu
Genetic Background: involves: 129S/SvEv

Allelic Composition: Ctnnb1tm1Max/Ctnnb1+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm1Max/Ctnnb1tm2Kem,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm2Kem/Ctnnb1+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm1Max/Ctnnb1+,Hesx1tm1Icar/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

 MP:0001286 abnormal eye development "malformation or arrest of differentiation of the visual organ" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:cls, J:49840]
Show

Allelic Composition: Cftrtm1.1Cwr/Cftrtm1.1Cwr
Genetic Background: involves: 129S1/Sv * 129S4/SvJae * 129X1/SvJ * C57BL/6

 MP:0001293 anophthalmia "congenital absence of all tissues of the eyes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, MGI:CML, J:71979]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm1Icar/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: B6.129S-Hesx1tm1(cre)Jpmb

Allelic Composition: Gt(ROSA)26Sortm1(Hesx1)Jpmb/Gt(ROSA)26Sortm1(Hesx1)Jpmb,Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6 * SJL

Allelic Composition: Hesx1tm2Jpmb/Hesx1tm2Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

Allelic Composition: Hesx1tm1Icar/Hesx1tm2Jpmb
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * C57BL/6 * FVB/N

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

Allelic Composition: Hesx1tm4.1Jpmb/Hesx1tm4.1Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6 * C57BL/6J * SJL

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: involves: 129S/SvEv

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv

Allelic Composition: Hesx1tm1Icar/Hesx1+,Tcf7l1tm2Efu/Tcf7l1+
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1+,Tcf7l1tm1Efu/Tcf7l1tm2Efu
Genetic Background: involves: 129S/SvEv

Allelic Composition: Ctnnb1tm1Max/Ctnnb1+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm1Max/Ctnnb1tm2Kem,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm2Kem/Ctnnb1+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm1Max/Ctnnb1+,Hesx1tm1Icar/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

 MP:0001297 microphthalmia "reduced average size of the eyes" [J:18048]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm1Icar/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: B6.129S-Hesx1tm1(cre)Jpmb

Allelic Composition: Gt(ROSA)26Sortm1(Hesx1)Jpmb/Gt(ROSA)26Sortm1(Hesx1)Jpmb,Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6 * SJL

Allelic Composition: Hesx1tm2Jpmb/Hesx1tm2Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

Allelic Composition: Hesx1tm1Icar/Hesx1tm2Jpmb
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * C57BL/6 * FVB/N

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

Allelic Composition: Hesx1tm4.1Jpmb/Hesx1tm4.1Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6 * C57BL/6J * SJL

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1+
Genetic Background: involves: 129S/SvEv

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: involves: 129S/SvEv

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv

Allelic Composition: Hesx1tm1Icar/Hesx1+,Tcf7l1tm2Efu/Tcf7l1+
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1+,Tcf7l1tm1Efu/Tcf7l1tm2Efu
Genetic Background: involves: 129S/SvEv

Allelic Composition: Ctnnb1tm1Max/Ctnnb1+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm1Max/Ctnnb1tm2Kem,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm2Kem/Ctnnb1+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm1Max/Ctnnb1+,Hesx1tm1Icar/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

 MP:0002092 abnormal eye morphology "abnormal development of the eye tissues resulting in morphological abnormality or abnormal structure of the visual system" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm1Icar/Hesx1+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Gt(ROSA)26Sortm1(Hesx1)Jpmb/Gt(ROSA)26Sor+,Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6 * SJL

Allelic Composition: Gt(ROSA)26Sortm1(Hesx1)Jpmb/Gt(ROSA)26Sortm1(Hesx1)Jpmb,Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6 * SJL

Allelic Composition: Hesx1tm2Jpmb/Hesx1tm2Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0002169 no phenotype detected "normal, viable and fertile appearance and behavior; indistinguishable from controls" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Gt(ROSA)26Sortm1Sor/Gt(ROSA)26Sor+,Hesx1tm1(cre)Jpmb/Hesx1+
Genetic Background: involves: 129S/SvEv * 129S4/SvJaeSor * C57BL/6 * FVB/N

 MP:0002196 acallosal "absence of the commissural plate interconnecting the cortical hemispheres of the brain" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0002233 abnormal nose morphology "any structural anomaly of the organ that is specialized for smell and is part of the respiratory system " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Hesx1tm1Icar/Hesx1+
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0002237 abnormal nasal cavity morphology "any structural anomaly of the portion of the respiratory tract that extends from the nares to the pharynx; the nasal cavity is lined with ciliated mucosa" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, MeSH:National Library of Medicine - Medical Subject Headings , 2003]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0003232 abnormal forebrain development "anomaly in the formation or patterning of the anterior primitive cerebral vesicle; most rostral of three primary vesicles of the embryonic neural tube" [J:93081, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm1Icar/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd

Allelic Composition: Hesx1tm1Icar/Hesx1tm3Jpmb
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * C57BL/6 * FVB/N

Allelic Composition: Hesx1tm4.1Jpmb/Hesx1tm4.1Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6 * C57BL/6J * SJL

Allelic Composition: Ctnnb1tm1Max/Ctnnb1+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm2Kem/Ctnnb1+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * 129S1/Sv * 129X1/SvJ

Allelic Composition: Ctnnb1tm1Max/Ctnnb1+,Hesx1tm1Icar/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S1/Sv * 129X1/SvJ

 MP:0003425 abnormal optic vesicle formation "anomalous formation of the hollow outgrowth from the lateral aspects of the embryonic forebrain from which the retina and optic nerve develop" [smb:Susan M Bello, Mouse Genome Informatics Curator, J:94391]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Gt(ROSA)26Sortm1Sor/Gt(ROSA)26Sor+,Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv * C57BL/6

 MP:0004096 abnormal midbrain-hindbrain boundary development "anomaly in the formation of the midbrain-hindbrain domain, comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages; an organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0004163 abnormal adenophysis morphology "any malformation or absence of the anterior part of the pituitary that secretes a variety of hormones; its function is regulated by the hypothalamus" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Hesx1tm2Jpmb/Hesx1tm2Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0004269 abnormal optic cup morphology "any structural anomaly of double walled stuctured formed by expansion and invagination of the distal end of the optic vesicle that develops into the pigmented and sensory layers of the retina while the mouth of the optic cup eventually forms the pupil of the eye" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0004309 absent otic vesicle "absence of the simple epithelial sac formed from the otic placode that gives rise to the structures of the inner ear" [MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0005193 abnormal anterior eye segment morphology "anomalous structure of any of the parts of the eye that lie in front of, or ventral to, the lens (inclusive) " [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: involves: 129S/SvEv

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1Icar
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv

 MP:0006198 enophthalmos "sinking or retraction of the eye back into the socket" [ncbi:Matthew Mailman, NCBI request, smb:Susan M Bello, Mouse Genome Informatics Curator]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0006292 abnormal olfactory placode morphology "any structural abnormality in the paired ectodermal placodes that come to lie in the bottom of the olfactory pits as the pits are deepened by the growth of the surrounding medial and lateral nasal processes" [J:62024, MGI:anna "Anna V. Anagnostopoulos, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0006306 abnormal nasal pit morphology "malformation of one or both of a pair of depressions formed in the developing face that give rise to the rostral portion of the nasal meatus" [J:119812, MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0008219 abnormal dorsal telencephalic commissure morphology "any structural anomaly of the fiber tracts that connect the dorsal region of the two cerebral hemispheres and span the longitudinal fissure, including the corpus callosum and hippocampal commissure" [PMID:16715082]
Show

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0008223 absent hippocampal commissure "absence of the triangular subcallosal plate of commissural fibers resulting from the converging of the right and left fornix bundles which exchange numerous fibers and which curve back in the contralateral fornix to end in the hippocampus of the opposite side" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0008225 abnormal anterior commissure morphology "any structural anomaly of a round bundle of nerve fibers that crosses the midline of the brain near the anterior limit of the third ventricle" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0008227 absent anterior commissure "absence of a round bundle of nerve fibers that crosses the midline of the brain near the anterior limit of the third ventricle" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0008321 small adenohypophysis "reduced size of the anterior part of the pituitary that secretes a variety of hormones" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0008789 abnormal olfactory epithelium morphology "any structural anomaly in the epithelial cells that line the interior of the nose" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0009901 abnormal frontonasal prominence morphology "any structural anomaly of an unpaired facial process in the embryo formed from the tissues surrounding the forebrain vesicle that develops into the forehead and bridge of the nose/snout" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0010059 olfactory bulb hypoplasia "underdevelopment or reduced size, usually due to a reduced number of cells, of the forebrain region that coordinates neuronal signaling involved in the perception of smell" [ISBN:0-683-40008-8 "Stedman s Medical Dictionary, 27th edition", MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0011086 partial postnatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms anytime between the neonatal period and weaning age (Mus: P1 to approximately 3 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Gt(ROSA)26Sortm1(Hesx1)Jpmb/Gt(ROSA)26Sor+,Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6 * SJL

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0011088 partial neonatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms within the neonatal period after birth (Mus: P0)" [MGI:csmith]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0011089 complete perinatal lethality "death of all organisms of a given genotype in a population within the perinatal period (Mus: E18.5 through postnatal day 1)" [MGI:csmith]
Show

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1(cre)Jpmb
Genetic Background: B6.129S-Hesx1tm1(cre)Jpmb

 MP:0011759 absent Rathke s pouch "absence of the diverticulum arsing from the embryonic buccal cavity from which the anterior lobe of the pituitary gland is developed" [MGI:anna]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0012004 abnormal septum pellucidum morphology "any structural anomaly of the thin, triangular, vertical membrane separating the anterior horns of the left and righ of the septum, which has strong projections to hypothalamic and midbrain regions and receives projections from the hippocampus and amygdala" [MGI:csmith, MPD:Molly]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0012138 decreased forebrain size "size reduction or truncation of the anterior of the three primary divisions of the developing chordate brain or the corresponding part of the adult brain (in vertebrates, includes especially the cerebral hemispheres, the thalamus, and the hypothalamus and especially in higher vertebrates is the main control center for sensory and associative information processing, visceral functions, and voluntary motor functions)" [GO:0048853]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

Allelic Composition: Gt(ROSA)26Sortm1Sor/Gt(ROSA)26Sor+,Hesx1tm1(cre)Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * 129S4/SvJaeSor * C57BL/6 * FVB/N

Allelic Composition: Gt(ROSA)26Sortm1Sor/Gt(ROSA)26Sor+,Hesx1tm1(cre)Jpmb/Hesx1tm2Jpmb
Genetic Background: involves: 129S/SvEv * 129S4/SvJaeSor * C57BL/6 * FVB/N

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1tm1Icar,Tcf7l1tm2Efu/Tcf7l1+
Genetic Background: involves: 129P2/OlaHsd * 129S/SvEv

Allelic Composition: Hesx1tm1(cre)Jpmb/Hesx1+,Tcf7l1tm1Efu/Tcf7l1tm2Efu
Genetic Background: involves: 129S/SvEv

 MP:0012178 absent frontonasal prominence "absence of the unpaired embryonic prominence that is formed by the tissues surrounding the forebrain vesicle and develops into the forehead and bridge of the nose/snout" [MGI:anna]
Show

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0012703 decreased embryonic neuroepithelium thickness "reduced width of the epithelial cell layer that lines the neural tube and develops into the nervous system and into the neural crest cells" [MGI:anna]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0013342 bifurcated Rathke s pouch "the appearance of an abnormal division in the diverticulum arsing from the embryonic buccal cavity from which the anterior lobe of the pituitary gland is developed " [MGI:Anna, PMID:19074474]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0013351 abnormal Rathke s pouch development "any anomaly in the formation of the pouch of ectoderm which grows out from the upper surface of the embryonic stomodeum and gives rise to the anterior and intermediate lobes of the pituitary gland" [MGI:Anna]
Show

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0013356 ectopic pituitary gland "a pituitary gland located outside of its normal position" [MGI:Anna]
Show

Allelic Composition: Hesx1tm2Jpmb/Hesx1tm2Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0013357 ectopic adenohypophysis "an anterior pituitary gland located outside of its normal position due to arrest of migration from a pharyngeocranial location to the sellar region; a portion or all of the adenohypophysis may persist in the pathway of the pharyngeal pouch, either in the nasopharyngeal wall or within the sphenoid bone" [MGI:Anna, PMID:19093031]
Show

Allelic Composition: Hesx1tm3Jpmb/Hesx1tm3Jpmb
Genetic Background: involves: 129S/SvEv * C57BL/6J * FVB/N

 MP:0013597 small vomeronasal organ "reduced size of the tubular, crescent-sensory organ with a luminal epithelium that contains chemosensitive receptor cells with microvilli that are thought to detect pheromones and transmit signals to the remainder of the accessory olfactory system" [http://ctrgenpath.net/static/atlas/mousehistology/Windows/senses/jacobsonorgan.html, http://en.wikipedia.org/wiki/Vomeronasal_organ#Structure, MGI:csmith]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

 MP:0014198 absent pituitary infundibular stalk "absence of the apical portion of the tubular structure extending from the hypothalamus to the posterior lobe of the pituitary gland" [MGI:Anna]
Show

Allelic Composition: Grin1tm2Blt/Grin1tm2Blt
Genetic Background: involves: 129P2/OlaHsd * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   


© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr