ENSMUSG00000040972


Mus musculus

Features
Gene ID: ENSMUSG00000040972
  
Biological name :Igsf21
  
Synonyms : Igsf21 / Immunoglobulin superfamily member 21 / Q7TNR6
  
Possible biological names infered from orthology : immunoglobin superfamily member 21 / Q96ID5
  
Species: Mus musculus
  
Chr. number: 4
Strand: -1
Band: D3
Gene start: 140026846
Gene end: 140246784
  
Corresponding Affymetrix probe sets: 10517731 (MoGene1.0st)   1433950_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000046558
NCBI entrez gene - 230868     See in Manteia.
MGI - MGI:2681842
RefSeq - NM_198610
RefSeq - XM_006538799
RefSeq Peptide - NP_941012
swissprot - Q7TNR6
Ensembl - ENSMUSG00000040972
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 igsf21aENSDARG00000031049Danio rerio
 igsf21bENSDARG00000056084Danio rerio
 IGSF21ENSGALG00000037479Gallus gallus
 IGSF21ENSG00000117154Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR003599  Immunoglobulin subtype
 IPR007110  Immunoglobulin-like domain
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005575 cellular_component ND
 cellular_componentGO:0005576 extracellular region IEA
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0004792 abnormal synaptic vesicle number "anomaly in the number of the small, membrane bound sacs that contain various neurotransmitter molecules that are concentrated at pre-synaptic membranes and release the neurotransmitters by fusion of these vesicles with the presynaptic membrane, followed by exocytosis of their contents" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Tagln2tm1Cdj/Tagln2tm1Cdj,Tg(TcraTcrb)1100Mjb/0
Genetic Background: involves: 129S4/SvJae * C57BL/6

 MP:0009142 decreased prepulse inhibition "decrease in the ability of a relatively mild stimulus to suppress the response to a strong, startle-eliciting stimulus" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Tagln2tm1Cdj/Tagln2tm1Cdj,Tg(TcraTcrb)1100Mjb/0
Genetic Background: involves: 129S4/SvJae * C57BL/6

 MP:0009435 abnormal miniature inhibitory postsynaptic currents "defect in the size or duration of spontaneous currents detected in postsynaptic cells that occur in the absence of an inhibitory impulse" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Tagln2tm1Cdj/Tagln2tm1Cdj,Tg(TcraTcrb)1100Mjb/0
Genetic Background: involves: 129S4/SvJae * C57BL/6

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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