ENSMUSG00000041040


Mus musculus

Features
Gene ID: ENSMUSG00000041040
  
Biological name :Fam117b
  
Synonyms : Fam117b / Protein FAM117B / Q3U3E2
  
Possible biological names infered from orthology : family with sequence similarity 117 member B / Q6P1L5
  
Species: Mus musculus
  
Chr. number: 1
Strand: 1
Band: C2
Gene start: 59913006
Gene end: 59985346
  
Corresponding Affymetrix probe sets: 10346668 (MoGene1.0st)   1434010_at (Mouse Genome 430 2.0 Array)   1444629_at (Mouse Genome 430 2.0 Array)   1446891_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000041671
Ensembl peptide - ENSMUSP00000138042
NCBI entrez gene - 72750     See in Manteia.
MGI - MGI:1920000
RefSeq - NM_001037725
RefSeq Peptide - NP_001032814
swissprot - M0QWW4
swissprot - Q3U3E2
Ensembl - ENSMUSG00000041040
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 fam117baENSDARG00000074921Danio rerio
 fam117bbENSDARG00000009839Danio rerio
 FAM117BENSGALG00000008466Gallus gallus
 Q6P1L5ENSG00000138439Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Glcci1 / Q8K3I9 / Glucocorticoid-induced transcript 1 protein / Q86VQ1* / glucocorticoid induced 1*ENSMUSG0000002963840
Q7TNF9 / Fam117a / Protein FAM117A / Q9C073* / family with sequence similarity 117 member A*ENSMUSG0000003889327


Protein motifs (from Interpro)
Interpro ID Name
 IPR026641  Protein FAM117B
 IPR026642  Glucocorticoid-induced transcript 1/FAM117


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0008150 biological_process ND
 molecular_functionGO:0003674 molecular_function ND


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000186 decreased circulating HDL cholesterol level "lower than average level of high density lipoprotein in blood; this molecule transports cholesterol to the liver for excretion in bile" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Elmod1tm1a(EUCOMM)Hmgu/Elmod1tm1a(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Elmod1tm1a(EUCOMM)Hmgu/H

 MP:0001325 abnormal retina morphology "structural or developmental anomaly of the thin layer of neural tissue lining the back of the eyeball which contains visual receptors " [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Elmod1tm1a(EUCOMM)Hmgu/Elmod1tm1a(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Elmod1tm1a(EUCOMM)Hmgu/H

 MP:0002644 decreased circulating triglyceride level "lower than normal concentration of triacylglycerols in the blood" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Elmod1tm1a(EUCOMM)Hmgu/Elmod1tm1a(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Elmod1tm1a(EUCOMM)Hmgu/H

 MP:0002896 abnormal bone mineralization "defect in the process by which minerals are deposited into bone" [csmith:Cynthia L. Smith , Mouse Genome Informatics Curator]
Show

Allelic Composition: Elmod1tm1a(EUCOMM)Hmgu/Elmod1tm1a(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Elmod1tm1a(EUCOMM)Hmgu/H

 MP:0005179 decreased total circulating cholesterol level "less than the normal concentration in the blood of these most abundant steroids in animal tissues, and precursors to steroid hormones and bile salts; also components of plasma membranes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Elmod1tm1a(EUCOMM)Hmgu/Elmod1tm1a(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Elmod1tm1a(EUCOMM)Hmgu/H

 MP:0005566 decreased blood urea nitrogen level "low circulating concentration of nitrogen, in the form of urea; commonly used to measure renal function" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary:ISBN 0-683-40008-8]
Show

Allelic Composition: Elmod1tm1a(EUCOMM)Hmgu/Elmod1tm1a(EUCOMM)Hmgu
Genetic Background: C57BL/6N-Elmod1tm1a(EUCOMM)Hmgu/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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