ENSMUSG00000041609


Mus musculus

Features
Gene ID: ENSMUSG00000041609
  
Biological name :Bicdl1
  
Synonyms : A0JNT9 / BICD family-like cargo adapter 1 / Bicdl1
  
Possible biological names infered from orthology : BICD family like cargo adaptor 1 / Q6ZP65
  
Species: Mus musculus
  
Chr. number: 5
Strand: -1
Band: F
Gene start: 115648175
Gene end: 115731621
  
Corresponding Affymetrix probe sets: 10533007 (MoGene1.0st)   1426816_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000112949
Ensembl peptide - ENSMUSP00000120038
Ensembl peptide - ENSMUSP00000119664
Ensembl peptide - ENSMUSP00000119015
Ensembl peptide - ENSMUSP00000053547
Ensembl peptide - ENSMUSP00000112842
NCBI entrez gene - 75665     See in Manteia.
MGI - MGI:1922915
RefSeq - XM_006530490
RefSeq - NM_001080808
RefSeq - XM_006530487
RefSeq - XM_006530489
RefSeq Peptide - NP_001074277
swissprot - D3YTR9
swissprot - D6RJL4
swissprot - A0JNT9
swissprot - F6R5X6
swissprot - F6RQR3
Ensembl - ENSMUSG00000041609
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 bicdl1ENSDARG00000074761Danio rerio
 BICDL1ENSGALG00000007319Gallus gallus
 BICDL1ENSG00000135127Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Bicdl2 / Q8CHW5 / BICD family-like cargo adapter 2 / A1A5D9* / BICD family like cargo adaptor 2*ENSMUSG0000004378229


Protein motifs (from Interpro)
Interpro ID Name
 IPR006933  HAP1, N-terminal


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0007399 nervous system development IEA
 biological_processGO:0031175 neuron projection development IMP
 biological_processGO:0055107 Golgi to secretory granule transport IMP
 cellular_componentGO:0005737 cytoplasm IEA
 cellular_componentGO:0005813 centrosome IDA
 cellular_componentGO:0005815 microtubule organizing center IEA
 cellular_componentGO:0005856 cytoskeleton IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI
 molecular_functionGO:0017137 Rab GTPase binding IDA
 molecular_functionGO:0034452 dynactin binding IDA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0000689 abnormal spleen morphology "atypical structure of the organ that functions to filter blood and to store red corpuscles and platelets" [Stedman s Medical Dictionary:ISBN 0-683-40008-8, J:27463]
Show

Allelic Composition: Cbx2tm1b(KOMP)Wtsi/Cbx2+
Genetic Background: C57BL/6N-Cbx2tm1b(KOMP)Wtsi/H

 MP:0000691 enlarged spleen "increased spleen size" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
Show

Allelic Composition: Cbx2tm1b(KOMP)Wtsi/Cbx2+
Genetic Background: C57BL/6N-Cbx2tm1b(KOMP)Wtsi/H

 MP:0001258 decreased body length "decreased crown to tail distance compared to controls" [cwg:Carroll W. Goldsmith, Mouse Genome Informatics Curator]
Show

Allelic Composition: Cbx2tm1b(KOMP)Wtsi/Cbx2+
Genetic Background: C57BL/6N-Cbx2tm1b(KOMP)Wtsi/H

 MP:0002757 reduced vertical activity "lesser than average time spent jumping or rearing" [J:82829, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Cbx2tm1b(KOMP)Wtsi/Cbx2+
Genetic Background: C57BL/6N-Cbx2tm1b(KOMP)Wtsi/H

 MP:0002764 short tibia " reduced length of the medial and larger bone of the lower leg" [J:12736, pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
Show

Allelic Composition: Cbx2tm1b(KOMP)Wtsi/Cbx2+
Genetic Background: C57BL/6N-Cbx2tm1b(KOMP)Wtsi/H

 MP:0003020 decreased circulating chloride level "reduced concentration of chlorine salts in the circulation" [MeSH:National Library of Medicine - Medical Subject Headings , 2003, RGD:Rat Genome Database submission]
Show

Allelic Composition: Cbx2tm1b(KOMP)Wtsi/Cbx2+
Genetic Background: C57BL/6N-Cbx2tm1b(KOMP)Wtsi/H

 MP:0003961 decreased lean body mass "less than average fat-free physical bulk or volume of the body including all its components except adipose tissue" [honda:Hiraoki Onda, Mouse GEnome Informatics Curator]
Show

Allelic Composition: Cbx2tm1b(KOMP)Wtsi/Cbx2+
Genetic Background: C57BL/6N-Cbx2tm1b(KOMP)Wtsi/H

 MP:0011110 partial preweaning lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and weaning age (Mus: approximately 3-4 weeks of age)" [MGI:csmith]
Show

Allelic Composition: Cbx2tm1b(KOMP)Wtsi/Cbx2+
Genetic Background: C57BL/6N-Cbx2tm1b(KOMP)Wtsi/H

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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