ENSMUSG00000041754


Mus musculus

Features
Gene ID: ENSMUSG00000041754
  
Biological name :Trem3
  
Synonyms : Trem3 / triggering receptor expressed on myeloid cells 3
  
Possible biological names infered from orthology :
  
Species: Mus musculus
  
Chr. number: 17
Strand: 1
Band: C
Gene start: 48247777
Gene end: 48258841
  
Corresponding Affymetrix probe sets: 10445753 (MoGene1.0st)   1460271_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000044478
NCBI entrez gene - 58218     See in Manteia.
MGI - MGI:1930003
RefSeq - XM_017317592
RefSeq - NM_021407
RefSeq - XM_006524731
RefSeq Peptide - NP_067382
swissprot - Q9JKE1
Ensembl - ENSMUSG00000041754
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
No match


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Trem1 / Q9JKE2 / triggering receptor expressed on myeloid cells 1 / Q9NP99*ENSMUSG0000004226531


Protein motifs (from Interpro)
Interpro ID Name
 IPR013106  Immunoglobulin V-set domain
 IPR013783  Immunoglobulin-like fold
 IPR036179  Immunoglobulin-like domain superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0002374 cytokine secretion involved in immune response IGI
 biological_processGO:0016477 cell migration IGI
 biological_processGO:0030593 neutrophil chemotaxis IGI
 biological_processGO:0042107 cytokine metabolic process IGI
 biological_processGO:0050755 chemokine metabolic process IGI
 biological_processGO:0070945 neutrophil mediated killing of gram-negative bacterium IGI
 biological_processGO:0072672 neutrophil extravasation IGI
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 molecular_functionGO:0005515 protein binding IPI


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

0 s.

 
External programs and data are copyrighted by and are the property of their respective authors.
The Manteia system, data and analyses are provided "as is" with no warranties, expressed or implied as to capabilities or accuracy. User assumes the entire risk as to the results and performance of the software, data and documentation


                   

© Olivier Tassy / Olivier Pourquie 2007-2024
contact: otassy@igbmc.fr