ENSMUSG00000042045


Mus musculus

Features
Gene ID: ENSMUSG00000042045
  
Biological name :Sln
  
Synonyms : Q9CQD6 / Sarcolipin / Sln
  
Possible biological names infered from orthology : O00631
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: A5.3
Gene start: 53850164
Gene end: 53854560
  
Corresponding Affymetrix probe sets: 10585390 (MoGene1.0st)   1420883_at (Mouse Genome 430 2.0 Array)   1420884_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000036950
NCBI entrez gene - 66402     See in Manteia.
MGI - MGI:1913652
RefSeq - NM_025540
RefSeq Peptide - NP_079816
swissprot - Q9CQD6
Ensembl - ENSMUSG00000042045
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 SLNENSGALG00000017168Gallus gallus
 SLNENSG00000170290Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR008028  Sarcolipin


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0051924 regulation of calcium ion transport ISS
 biological_processGO:0070296 sarcoplasmic reticulum calcium ion transport IMP
 biological_processGO:1901077 regulation of relaxation of muscle IMP
 biological_processGO:1901894 regulation of calcium-transporting ATPase activity IEA
 cellular_componentGO:0005783 endoplasmic reticulum IEA
 cellular_componentGO:0005789 endoplasmic reticulum membrane IEA
 cellular_componentGO:0016020 membrane IEA
 cellular_componentGO:0016021 integral component of membrane IEA
 cellular_componentGO:0016529 sarcoplasmic reticulum ISS
 cellular_componentGO:0033017 sarcoplasmic reticulum membrane IEA
 molecular_functionGO:0030234 enzyme regulator activity IEA


Pathways (from Reactome)
Pathway description
Ion homeostasis
Ion transport by P-type ATPases


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
 MP:0001552 increased circulating triglyceride level "higher than normal concentration of triacylglycerols in the blood" [Stedman s Medical Dictionary , 27th edition:ISBN 0-683-40008-8, J:65416]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0002628 fatty liver "an accumulation of fat deposits in the liver " [pvb:Pierre Vanden Borre , Mouse Genome Informatics Curator]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0005178 increased total circulating cholesterol level "greater than the normal concentration in the blood of these most abundant steroids in animal tissues, and precursors to steroid hormones and bile salts; also components of plasma membranes" [Stedman s Medical Dictionary:ISBN 0-683-40008-8]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0005290 decreased oxygen consumption "less than the normal rate at which oxygen enters the blood from alveolar gas; this is equal in the steady state to the consumption of oxygen by tissue metabolism throughout the body" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0005293 impaired glucose tolerance "less than the normal response to oral consumption or intravenous injection of specified amounts of glucose and indicative of insulin resistance; measured by determining whole blood or plasma sugar level in a fasting state before and after taking glucose at specified intervals" [MeSH:National Library of Medicine - Medical Subject Headings , 2003]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0005534 decreased body temperature "less than the level of heat natural to a living being" [RGD:Rat Genome Database submission, Stedman s Medical Dictionary:ISBN 0-683-40008-8, cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0005559 increased circulating glucose level "greater than the normal concentration in the blood of this major monosaccharide of the body; it is an important energy source" [cwg:Carroll-Ann W. Goldsmith , Mouse Genome Informatics curator, RGD:Rat Genome Database submission]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0005599 increased cardiac muscle contractility "greater than the normal ability of the heart muscle to shorten or to develop increased tension " [Stedman s Medical Dictionary:ISBN 0-683-40008-8, RGD:Rat Genome Database submission]
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Allelic Composition: Terttm1Sear/Terttm1Sear
Genetic Background: involves: 129S4/SvJae * C57BL/6

 MP:0005658 susceptibility to diet-induced obesity "more likely to become excessively fat or to increase fat in the subcutaneous connective tissue as a result of consuming a diet geared to increase body fat " [cwg:Carroll-Ann W. Goldsmith, Mouse Genome Informatics curator]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0008908 increased total fat pad weight "greater than average weight of the fat pads" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0009121 increased white fat cell lipid droplet size "increase in the size of the single large lipid droplet or vacuole of white fat cells" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0009124 increased brown fat cell lipid droplet size "increase in the size of the multiple small droplets of triglycerides found in brown adipocytes" [MGI:csmith "Cynthia L. Smith, Mouse Genome Informatics Curator"]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0009763 increased sensitivity to induced morbidity/mortality "decrease in the amount of an external agent required to cause death or diseased state" [MGI:smb "Susan M. Bello, Mouse Genome Informatics Curator"]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0011049 impaired adaptive thermogenesis "inability or reduced ability to produce heat in response to short term environmental changes, such as stress, diet or reduced temperature, often resulting in metabolic inefficiency or death" [MGI:csmith, PMID:16836744]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0011101 partial prenatal lethality "the appearance of lower than Mendelian ratios of organisms of a given genotype due to death of some, but not all of the organisms between fertilization and birth (Mus: approximately E18.5)" [MGI:csmith]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0011940 decreased food intake "reduction in the total number of calories/food amount taken in over time when compared to the normal state" [MGI:csmith]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

 MP:0014142 increased body fat mass "increased physical bulk or volume of fat in the whole body" [MGI:csmith]
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Allelic Composition: Cfap157tm1b(EUCOMM)Hmgu/Cfap157tm1b(EUCOMM)Hmgu
Genetic Background: involves: C57BL/6 * SJL

  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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