ENSMUSG00000042185


Mus musculus

Features
Gene ID: ENSMUSG00000042185
  
Biological name :Nfrkb
  
Synonyms : Nfrkb / Nuclear factor related to kappa-B-binding protein / Q6PIJ4
  
Possible biological names infered from orthology : nuclear factor related to kappaB binding protein / Q6P4R8
  
Species: Mus musculus
  
Chr. number: 9
Strand: 1
Band: A4
Gene start: 31386192
Gene end: 31421333
  
Corresponding Affymetrix probe sets: 10584095 (MoGene1.0st)   1434753_at (Mouse Genome 430 2.0 Array)   1445551_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000083341
Ensembl peptide - ENSMUSP00000149841
Ensembl peptide - ENSMUSP00000119622
Ensembl peptide - ENSMUSP00000119025
Ensembl peptide - ENSMUSP00000116404
NCBI entrez gene - 235134     See in Manteia.
MGI - MGI:2442410
RefSeq - XM_017313308
RefSeq - XM_017313307
RefSeq - XM_006510218
RefSeq - NM_172766
RefSeq - XM_006510219
RefSeq - XM_006510221
RefSeq Peptide - NP_766354
swissprot - Q6PIJ4
swissprot - D6RIN8
swissprot - A0A1L1SSC9
swissprot - D6RD05
swissprot - D6RHP5
Ensembl - ENSMUSG00000042185
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 nfrkbENSDARG00000091512Danio rerio
 NFRKBENSGALG00000001306Gallus gallus
 NFRKBENSG00000170322Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
No match


Protein motifs (from Interpro)
Interpro ID Name
 IPR024867  Nuclear factor related to kappa-B-binding protein
 IPR025220  NFRKB winged helix-like domain


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006281 DNA repair IEA
 biological_processGO:0006310 DNA recombination IEA
 biological_processGO:0006351 transcription, DNA-templated IEA
 biological_processGO:0006355 regulation of transcription, DNA-templated IEA
 biological_processGO:0006974 cellular response to DNA damage stimulus IEA
 biological_processGO:0008150 biological_process ND
 cellular_componentGO:0005634 nucleus ISO
 cellular_componentGO:0031011 Ino80 complex IEA
 molecular_functionGO:0002020 protease binding IEA
 molecular_functionGO:0003677 DNA binding IEA


Pathways (from Reactome)
Pathway description
UCH proteinases
DNA Damage Recognition in GG-NER


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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