ENSMUSG00000042408


Mus musculus

Features
Gene ID: ENSMUSG00000042408
  
Biological name :Zmym6
  
Synonyms : zinc finger, MYM-type 6 / Zmym6
  
Possible biological names infered from orthology : AC114490.2
  
Species: Mus musculus
  
Chr. number: 4
Strand: 1
Band: D2.2
Gene start: 127077383
Gene end: 127124372
  
Corresponding Affymetrix probe sets: 10508228 (MoGene1.0st)   1438685_at (Mouse Genome 430 2.0 Array)   
  
Cross references: Ensembl peptide - ENSMUSP00000045366
Ensembl peptide - ENSMUSP00000092303
NCBI entrez gene - 100177     See in Manteia.
MGI - MGI:106505
RefSeq - NM_001285888
RefSeq - NM_001285885
RefSeq - NM_001285887
RefSeq - NM_177462
RefSeq Peptide - NP_001272814
RefSeq Peptide - NP_001272816
RefSeq Peptide - NP_001272817
RefSeq Peptide - NP_803413
swissprot - Q8BS54
swissprot - A2A7U2
Ensembl - ENSMUSG00000042408
  
See expression report in BioGPS
See gene description in Wikigenes
See co-cited genes in PubMed


Ortholog prediction (from Ensembl)
Ortholog nameID Species
 si:ch211-173p18.3ENSDARG00000035821Danio rerio
 si:ch211-266o15.1ENSDARG00000057681Danio rerio
 zmym4ENSDARG00000035823Danio rerio
 ENSGALG00000002499Gallus gallus
 AC114490.2ENSG00000271741Homo sapiens


Paralog prediction (from Ensembl)
Paralog nameIDSimilarity(%)
Zmym4 / A2A791 / zinc finger, MYM-type 4 / Q5VZL5* / zinc finger MYM-type containing 4*ENSMUSG0000004244637
Zmym2 / Q9CU65 / zinc finger, MYM-type 2 / Q9UBW7* / zinc finger MYM-type containing 2*ENSMUSG0000002194520
Zmym3 / Q9JLM4 / zinc finger, MYM-type 3 / Q14202* / zinc finger MYM-type containing 3*ENSMUSG0000003131019
Qrich1 / glutamine rich 1 / Q2TAL8*ENSMUSG000000066737
Zmym5 / Q3U2E2 / zinc finger, MYM-type 5 / Q9UJ78* / zinc finger MYM-type containing 5*ENSMUSG000000401236


Protein motifs (from Interpro)
Interpro ID Name
 IPR010507  Zinc finger, MYM-type
 IPR011017  TRASH domain
 IPR012337  Ribonuclease H-like superfamily


Gene Ontology (GO)
TypeGO IDTermEv.Code
 biological_processGO:0006357 regulation of transcription by RNA polymerase II IEA
 biological_processGO:0007010 cytoskeleton organization ISO
 biological_processGO:0007275 multicellular organism development IBA
 biological_processGO:0022604 regulation of cell morphogenesis ISO
 cellular_componentGO:0005654 nucleoplasm IBA
 cellular_componentGO:0005737 cytoplasm IBA
 molecular_functionGO:0000981 RNA polymerase II transcription factor activity, sequence-specific DNA binding IBA
 molecular_functionGO:0003677 DNA binding IBA
 molecular_functionGO:0008270 zinc ion binding IEA


Pathways (from Reactome)
Pathway description
No match


Phenotype (from MGI, Zfin or HPO)
IDPhenotypeDefinition Genetic BG
No match
  


Interacting proteins (from Reactome)
Interactor ID Name Interaction type
No match






 

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